Sequence detailsbmy_13501 (Coding sequence)

Part of scaffold_874 (SequenceType object (1))

For more information consult the page for scaffold_874 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNRPB2ENSBTAG00000027506 (Cow)

Gene Details

U2 small nuclear ribonucleoprotein B''

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000039319, Cow)

Protein Percentage 99.08%
cDNA percentage 95.11%
Ka/Ks Ratio 0.02257 (Ka = 0.0044, Ks = 0.1958)

Additional orthologs identified in other species via the OPTIC pipeline.

SNRPB2 (Human)   Snrpb2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 678 bp    Location:203880..214220   Strand:+
Raw sequence 
>bmy_13501
ATGGATATCAGACCAAATCACACAATTTATATCAACAATATGAATGACAAAATTAAAAAGGAAGAATTGAAGAGATCCCTGTATGCCCTATTTTCTCAGTTTGGCCACGTCGTAGATATTGTGGCTCTAAAGACCATGAAGATGAGGGGGCAAGCTTTTGTTATATTTAAGGAACTGGGCTCATCTACAAATGCCTTGAGACAGTTACAAGGATTTCCATTTTATGGCAAACCGATGCGAATCCAGTATGCAAAAACAGATTCTGATATAATATCTAAAATGCGTGGCACTTTTGCTGACAAAGAAAAGAAAAAAGAAAAGAAAAAAGCCAAAACTGTGGAACAGACTGCAACAACCATGAACAAAAAACCTGGTCAGGGAACACCAAATTCAGCTAATACCCAAGGAAATGCAGCACCAAATCCTCAGGTCCCTGATTACCCTCCAAACTATATTTTATTCCTTAATAATTTACCAGAAGAGACTAATGAGATGATGTTATCCATGCTGTTTAATCAATTCCCTGGTTTCAAGGAAGTACGTTTGGTACCTGGGAGGCATGACATTGCTTTTGTTGAATTTGAAAACGATGGACAGGCTGGAGCTGCCAGGGATGCTTTACAGGGATTTAAGATCACACCGTCCCATGCCATGAAGATCACCTATGCCAAGAAATAA

Related Sequences

bmy_13501T0 SequenceType object (3)

Length: 226 aa      View alignments
>bmy_13501T0
MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTMNKKPGQGTPNSANTQGNAAPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKITPSHAMKITYAKK*