Sequence details bmy_13502 (Coding sequence)

Part of scaffold_874 (Scaffold)

For more information consult the page for scaffold_874 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OTOR ENSTTRG00000006398 (Bottlenosed dolphin)

Gene Details

otoraplin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006052, Bottlenosed dolphin)

Protein Percentage 96.72%
cDNA percentage 98.36%
Ka/Ks Ratio 0.56318 (Ka = 0.0117, Ks = 0.0208)

OTOR ENSBTAG00000000516 (Cow)

Gene Details

otoraplin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000669, Cow)

Protein Percentage 93.8%
cDNA percentage 92.76%
Ka/Ks Ratio 0.14539 (Ka = 0.0287, Ks = 0.1972)

OTOR  (Minke Whale)

Gene Details

otoraplin

External Links

Gene match (Identifier: BACU014815, Minke Whale)

Protein Percentage 98.45%
cDNA percentage 98.71%
Ka/Ks Ratio 0.18603 (Ka = 0.0042, Ks = 0.0227)

Additional orthologs identified in other species via the OPTIC pipeline.

OTOR (Human)   Otor (Mouse)  

Genome Location

Sequence Coding sequence

Length: 390 bp    Location:221808..224544   Strand:+
Raw sequence 
>bmy_13502
ATGGCAAGACTATTGTTACTTTTCCTCCCAGGTCTTGTGGCCATATGTGCCGTGCATGGAATATTTATGGACAGACTTGCTTCCAGGAAGCTGTGTGCAGATGACGAGTGTGTCTATACTATTTCTCTGGCCCGAGCTCGAGAAGATTACAGTGCCCCAGACTGTAGATTCATTAACGTTAAAAAAGGGCAGTGGATCTATGTTTACTCAAAGCTGGTAAAAGAAAATGAAGCTGGAGAATTTTGGGCTGGCAGTGTTTATGGCGATCAACCTGAGGACGAGATGGGAACTGTGGGTTATTTCCCCAGCAACTTGGTCCAGGAGMAACATGTGTACCAAGAAGCCACCAAGGAAGTTCCCACCACGGATATTGACTTCTTCTGCGAGTAA

Related Sequences

bmy_13502T0 Protein

Length: 130 aa      View alignments
>bmy_13502T0
MARLLLLFLPGLVAICAVHGIFMDRLASRKLCADDECVYTISLARAREDYSAPDCRFINVKKGQWIYVYSKLVKENEAGEFWAGSVYGDQPEDEMGTVGYFPSNLVQEXHVYQEATKEVPTTDIDFFCE*