Sequence detailsbmy_13511 (Coding sequence)

Part of scaffold_874 (SequenceType object (1))

For more information consult the page for scaffold_874 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ACSS1ENSTTRG00000001631 (Bottlenosed dolphin)

Gene Details

acyl-CoA synthetase short-chain family member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001537, Bottlenosed dolphin)

Protein Percentage 78.94%
cDNA percentage 79.76%
Ka/Ks Ratio 0.31042 (Ka = 0.0372, Ks = 0.1198)

ACSS1ENSBTAG00000004281 (Cow)

Gene Details

acetyl-coenzyme A synthetase 2-like, mitochondrial

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005606, Cow)

Protein Percentage 91.15%
cDNA percentage 89.44%
Ka/Ks Ratio 0.1436 (Ka = 0.0555, Ks = 0.3865)

ACSS1 (Minke Whale)

Gene Details

acyl-CoA synthetase short-chain family member 1

External Links

Gene match (Identifier: BACU014822, Minke Whale)

Protein Percentage 15.99%
cDNA percentage 36.59%
Ka/Ks Ratio 0.10918 (Ka = 1.3898, Ks = 12.7294)

Additional orthologs identified in other species via the OPTIC pipeline.

ACSS1 (Human)   Acss1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1698 bp    Location:673920..693258   Strand:+
Raw sequence 
>bmy_13511
ATGACTATGCGTTCTGGCCCTCCCCCTTCTCTGACAGCCCTCCCTTCCTTGTGCCGCAGGGAACTGCTGGAGACCACGTGCCGCCTGGCCAACACGCTCAAGAGGCATGGAGTCCACCGAGGGGACCGGGTAGCCATCTACATGCCTGTCTCCCCGCTGGCTGTGGCCGCAATGCTGGCTTGCGCCAGGATTGGAGCCATCCACACTGTTGTCTTTGCTGGCTTCAGTGCGGGGTCCTTGGCTGGGAGGATCAATGATGCCAAGTGCAAGGTGGTTATCACCTTCAACCAAGGACTCCGGGGAGGGCGCGTGGTGGAGCTGAAGAAGATTGTGGACGAAGCCATAAAGCTCTGCCCAACCGTCCAGCATGTCCTCGTGGCTCACAGGACAGACAACAAGGTCCACATGGGGGATCTGGACATCCCCCTTGAGCAGGAAATGGCCAAGGAGGAGCCAGTGTGCGCCCCGGAGAGCATGGGCAGTGAGGACACGCTCTTCCTGCTGTACACCTCGGGGAGCACTGGGACGCCCAAGGGGCTTGTCCACACCCAGGCGGGCTACCTGCTGTACGCCGCTCTGACGCACCGGTTTGTGTTTGACTACCGGCCAGGTGACGTCTTTGGCTGCGTGGCTGACATCGGCTGGATTACGGGACACAGCTACGTGGTGTAYGGGCCTCTCTGCAATGGAGCGACCAGCGTCCTTTTTGAGAGCACCCCGGTTTACCCCGACGCTGGTCGGTACTGGGAGATGGTGCAGAGGTTGAAGATCAATCAGTTCTATGGCGCCCCGACGGCCTTCCGGCTGCTGCTGAAATTCGAGGATTCCTGGGTGAAGAAGTATGACCGCTCCTCCCTGCGGACCCTGGGCTCAGTGGGAGAGCCGATCAACCAGGAGGCCTGGGAGTGGCTGCACAGGGTGGTGGGGGACAGCCGGTGCACGCTGGTGGACACCTGGTGGCAGACAGAAACGGGGGGCATCTGCATCTCACCGCGGCCCTCGGAGGAGGGGGCAGAAATCCTGCCCTGCATGGCGATGAGGCCCTTGTTTGGCATCGTCCCTGTTCTCATGGACGAGAAGGGAAATGTCCTGAAGGGTGGAGATGTGTCCGGGGCTCTGTGCCTGTCCCAGGCCTGGCCAGGCATGGCCCGGACCATCTTCGGAGATCACCAGCGATTCATGGACGCCTACTTCGAGGTCTACCCGGGCTACTACTTCACAGGAGACGGGGCTTACCGAACTGAGGACGGCTACTACCAGATCACGGGGCGGATGGACGATGTCATCAACATCAGCGGCCACCGGCTGGGGACGGCGGAGATTGAGGACGCCATGGCTGACCACCCTGCAGTGCCCGAGACCGCCGTCGTCGGCTACCCCCACGACATCAAGGGAGAAGCTGCGTTCGCCTTCGTCGTGTTGAAAGATGACGTGGGTGACGCAGACGTGGTGGTGAAGGAGCTCCGGTCGGTGGTGGCCTCCAAGATCGCCAAGTACGCGGTACCCGACCAGGTCCTGGTAGTGAAACGTCTTCCAAAAACTCGGTCTGGAAAAGTCATGCGGAGGCTCCTGAGGAAGATCGTCACAGGCAGAGCTCAGGACCTGGGGGACACCACCACACTGGAGGACCCCACTGTCATCACGGAGATACTGAGCGCCTACCAGGAGTACAAAGCCAAGTGGAGGGCTGCCCAGTGA

Related Sequences

bmy_13511T0 SequenceType object (3)

Length: 566 aa      View alignments
>bmy_13511T0
MTMRSGPPPSLTALPSLCRRELLETTCRLANTLKRHGVHRGDRVAIYMPVSPLAVAAMLACARIGAIHTVVFAGFSAGSLAGRINDAKCKVVITFNQGLRGGRVVELKKIVDEAIKLCPTVQHVLVAHRTDNKVHMGDLDIPLEQEMAKEEPVCAPESMGSEDTLFLLYTSGSTGTPKGLVHTQAGYLLYAALTHRFVFDYRPGDVFGCVADIGWITGHSYVVYGPLCNGATSVLFESTPVYPDAGRYWEMVQRLKINQFYGAPTAFRLLLKFEDSWVKKYDRSSLRTLGSVGEPINQEAWEWLHRVVGDSRCTLVDTWWQTETGGICISPRPSEEGAEILPCMAMRPLFGIVPVLMDEKGNVLKGGDVSGALCLSQAWPGMARTIFGDHQRFMDAYFEVYPGYYFTGDGAYRTEDGYYQITGRMDDVINISGHRLGTAEIEDAMADHPAVPETAVVGYPHDIKGEAAFAFVVLKDDVGDADVVVKELRSVVASKIAKYAVPDQVLVVKRLPKTRSGKVMRRLLRKIVTGRAQDLGDTTTLEDPTVITEILSAYQEYKAKWRAAQ*