Sequence details bmy_13543 (Coding sequence)

Part of scaffold_893 (Scaffold)

For more information consult the page for scaffold_893 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AP5M1 ENSTTRG00000003512 (Bottlenosed dolphin)

Gene Details

adaptor-related protein complex 5, mu 1 subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003289, Bottlenosed dolphin)

Protein Percentage 98.32%
cDNA percentage 98.42%
Ka/Ks Ratio 0.24135 (Ka = 0.0092, Ks = 0.038)

AP5M1 ENSBTAG00000013043 (Cow)

Gene Details

AP-5 complex subunit mu-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017337, Cow)

Protein Percentage 94.69%
cDNA percentage 94.97%
Ka/Ks Ratio 0.19379 (Ka = 0.0262, Ks = 0.135)

AP5M1  (Minke Whale)

Gene Details

adaptor-related protein complex 5, mu 1 subunit

External Links

Gene match (Identifier: BACU015373, Minke Whale)

Protein Percentage 97.06%
cDNA percentage 97.35%
Ka/Ks Ratio 0.3448 (Ka = 0.0189, Ks = 0.0547)

Additional orthologs identified in other species via the OPTIC pipeline.

AP5M1 (Human)   Ap5m1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1077 bp    Location:490899..469314   Strand:-
Raw sequence 
>bmy_13543
ATGGCCCAGCGGGCAGTGTGGCTTATAAGCCACGAACCGGGAACTCCACTTTGTGGCACCGTCAGATTCTCCAGACGGTATCCAACTGTTGAAAAAAGAGCCGAAGTCTTCAATGGAGCAAGTTATGTGCCTGTTCCTGAAGATGGTCCCTTCCTTAAAGCACTGCTTTTTGAACTGAGATTATTGGATGATGATAAGGACTTTTCGGAGAGTCGTGATAGCTGTTCACACATCAATAAAACATCCATTTATGCACTCCCGCCGACCTGGAAAGCTGGAACATACAAAGGAAAACCACAGGTTTCTATATCTATCACTGAAAAGTGTGATTTAGAAGGAAGTATGCCAAATGTTACCATCAGCTTGAGTCTCCCCACCAACGGATCTCCACTTCAGGATATTCTGGTTCATCCTTGTGTGACATCTCTTGACTCTGCCATTCTGACTTCTAGTAGCATTGATGCAGCGGATGATTCTGCATTTAGTGGGCCTTACAAATTTCCACTCACTCCACCTTTAGAGTCATTCAACTTATGCTACTACACTTCTCAGGTCCCTGTGCCACCAATTTTGGGTTTTTATCAAGTAAAAGAGGAAGAAGTACAACTAAAAATAACAGTTAATTTAAAACTTCATGAAAGTGTGAAAAATAGTTTTGAATTCTGTGAAGCTCATATACCTTTTTACAACAGAGGTCCAGTCACACATGTGGAATACAAAGTTAGTTTTGGCCAGCTTGAAGTATTTCGAGAGAAAAGCTTATTGATCTGGATTATTGGACAGAAGTTCCCAAAATCAATGGAAATTAGTCTTTCTGGAACTGTAACTTTTGGAGCCAAGAGCCATGAAAAGCAGCCATTTGACCAGATTTGCATTGGAGGTACAGCATATTTAAAGCTTCATTTTAGGATCTTAGATTACACACTCACTGGGTGTTATGCGGATCAGCATTCAGTTCAAGTTTTTGCATCAGGAAAACCAAAAATAAGTACATACCGGAAACTAATTTCTTCTGACTATTACATCTGGAATTCTAAAGCTCCTGCTCCAGTAGCATATGGATCATTATTACTGTAA

Related Sequences

bmy_13543T0 Protein

Length: 359 aa      View alignments
>bmy_13543T0
MAQRAVWLISHEPGTPLCGTVRFSRRYPTVEKRAEVFNGASYVPVPEDGPFLKALLFELRLLDDDKDFSESRDSCSHINKTSIYALPPTWKAGTYKGKPQVSISITEKCDLEGSMPNVTISLSLPTNGSPLQDILVHPCVTSLDSAILTSSSIDAADDSAFSGPYKFPLTPPLESFNLCYYTSQVPVPPILGFYQVKEEEVQLKITVNLKLHESVKNSFEFCEAHIPFYNRGPVTHVEYKVSFGQLEVFREKSLLIWIIGQKFPKSMEISLSGTVTFGAKSHEKQPFDQICIGGTAYLKLHFRILDYTLTGCYADQHSVQVFASGKPKISTYRKLISSDYYIWNSKAPAPVAYGSLLL*