Part of scaffold_888 (Scaffold)

For more information consult the page for scaffold_888 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.62411 ENSBTAG00000010070 (Cow)

Gene Details

gasdermin-A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013285, Cow)

Protein Percentage 87.93%
cDNA percentage 93.39%
Ka/Ks Ratio 0.66228 (Ka = 0.0613, Ks = 0.0926)

GSDMA  (Minke Whale)

Gene Details

gasdermin A

External Links

Gene match (Identifier: BACU007023, Minke Whale)

Protein Percentage 92.48%
cDNA percentage 95.24%
Ka/Ks Ratio 0.82336 (Ka = 0.0476, Ks = 0.0578)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 699 bp    Location:1762..7186   Strand:+
>bmy_13547
ATGCGAGGGCGAGGAGAGAACCTGTACGTGGTGATGGAGGTGGGATCCATAAACCACAAGGAGGCTGTCACCATCCCCAAGGGCTGCGTCCTGGCATTTCGAGTGAGACAGCTGATGGTCAAAGGCAAAGATGAGTGGGATATTCCACACATCTGCAATGATAACATGCAAACCTTCCCCCCCGGCAAAGAGCCAGAAGAGGAGAAGCTCACCTGGGAGGTACACAAGGACTTCAGGACCCTAAAAGAAGAGTTTCAAAGGGAGACCCGGGAAGTGGAGAAGCTGAGCCCAGAAAGGAAGAGCTCCCTGTTCAGCTCCCTCAGCAAACTCTTAGGGAAGAAAAAGGAGCTAGAAGACCTGGAGCTCACGCTTGAAGGAGCTCTAGACAAAGGACATGAAGTAACCCTGGAGGCACTCCCAAAAGATGTCCTACTCTCAAAGGAGGCTATGGGTGCCGTCCTCTATTTCCTTGGAGCTCTAACAGAGCTAAGTGAAGCCCAACAGAAGCTGCTGGTACAATCCATGGAGAAAAAGATCTTACCTTTGCAGCTAAAGCTGGTGGAGAGCACAATGGAACAGAATTTCCTCCAGGATAAAGAGGATGTATTCCCCCTGCAACCTGAGCTGCTTTCCTCCCTTGGGGAAGAGGAACTGACCCTCACAGAGGCCCTAGTGGGACTGAGTGGCCTGGAAGTGTAG

Related Sequences

bmy_13547T0 Protein

Length: 233 aa      View alignments
>bmy_13547T0
MRGRGENLYVVMEVGSINHKEAVTIPKGCVLAFRVRQLMVKGKDEWDIPHICNDNMQTFPPGKEPEEEKLTWEVHKDFRTLKEEFQRETREVEKLSPERKSSLFSSLSKLLGKKKELEDLELTLEGALDKGHEVTLEALPKDVLLSKEAMGAVLYFLGALTELSEAQQKLLVQSMEKKILPLQLKLVESTMEQNFLQDKEDVFPLQPELLSSLGEEELTLTEALVGLSGLEV*