Part of scaffold_888 (Scaffold)

For more information consult the page for scaffold_888 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMD3 ENSTTRG00000016890 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016013, Bottlenosed dolphin)

Protein Percentage 99.43%
cDNA percentage 98.28%
Ka/Ks Ratio 0.0351 (Ka = 0.0025, Ks = 0.071)

PSMD3 ENSBTAG00000021461 (Cow)

Gene Details

26S proteasome non-ATPase regulatory subunit 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028608, Cow)

Protein Percentage 99.24%
cDNA percentage 96.12%
Ka/Ks Ratio 0.0179 (Ka = 0.0033, Ks = 0.1856)

PSMD3  (Minke Whale)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 3

External Links

Gene match (Identifier: BACU007024, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.25%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.037)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1575 bp    Location:10099..23685   Strand:+
>bmy_13548
ATGAAGCAGGAGGGCTCGGCGCGGCGCCGCGGCGCGGACAAGGCGAAGCCGCCGCCCGGCGGAGGGGAACAAGAACCACCGCCGCCCCCGGCGCCCCAGGATGTGGAGATGAAAGAGGAGGCGGCGGCGGGTGGCGGATCAACCGGCGAGACCGATGGCAAGGCGGCGGCTGCGGCGGCTGAGCACTCCCAGCGAGAGCTGGACACCGTCACCTTGGAGGACATCAAGGAGCACGTGAAACAGCTGGAGAAGGCAGTCTCGGGCAAGGAGCCTCGGTTCGTGCTGCGGGCCCTGCGGATGCTGCCTTCCACATCACGCCGCCTCAACCACTACGTTCTGTACAAGGCTGTGCATGGCTTTTTCACCTCCAACAATGCCACTCGAGACTTCTTGCTACCCTTCCTGGAAGAGCCCATGGACACAGAAGCCGATTTGCAGTTCCGTCCCCGAACAGGAAAAGCTGCGTCGGCTCCCCTCCTGCCCGAAGTGGAAGCCTACCTCCAGCTCCTCGTGGTCATCTTCCTGATGAACAGCAAGCGCTACAAAGAGAAGATCAGCACTCAGAACCGCCGGGCCCTGGACCTTGTGGCTGCAAAGTGTTACTATTACCATGCTCGGGTCTATGAGTTCCTGGACAAGCTGGATGTGGTGCGCAGCTTCTTGCACGCTCGGCTCCGGACCGCCACCCTGCGGCACGACGCGGACGGGCAGGCCACACTGCTGAACCTCCTGCTGCGGAACTACCTACACTACAGCTTGTACGACCAGGCCGAGAAGCTGGTGTCCAAGTCTGTGTTCCCCGAGCAGGCCAACAACAATGAGTGGGCACGGTACCTCTACTATACAGGGCGCATCAAAGCCATCCAGCTGGAGTACTCAGAGGCCCGGAGGACAATGACCAATGCCCTTCGCAAGGCCCCTCAGCACACAGCTGTCGGCTTCAAACAGACGGTGCACAAGCTTCTGATTGTGGTGGAGCTGTTGCTGGGGGAGATCCCGGACCGGCTGCAGTTCCGTCAACCATCCCTCAAGCGCTCGCTCATGCCTTACTTCCTTCTGACCCAGGCTGTCAGGACGGGAAACCTGGCCAAGTTCAACCAGGTCCTGGATCAGTTTGGGGAGAAGTTTCAAGCAGATGGGACCTACACCCTCATCATCCGACTACGACACAACGTCATCAAGACAGGTGTGCGCATGATCAGCCTCTCCTATTCCCGAATCTCCCTGGCGGACATCGCCCAGAAGCTGCAGCTTGATAGCCCAGAGGACGCAGAGTTCATTGTTGCCAAGGCCATCCGGGATGGCGTCATTGAGGCCAGCATCAACCACGAGAAGGGCTACGTCCAGTCCAAGGAGATGATTGACATCTATTCCACCCGTGAGCCCCAGCTAGCCTTCCACCAGCGCATCTCCTTCTGCCTGGATATTCACAACATGTCTGTCAAGGCCATGAGGTTTCCTCCCAAATCGTACAACAAGGACTTGGAGTCTGCAGAGGAGCGGCGCGAGCGGGAGCAGCAGGACTTGGAGTTTGCCAAGGAGATGGCGGAGGACGACGACGACAGCTTCCCTTGA

Related Sequences

bmy_13548T0 Protein

Length: 525 aa      View alignments
>bmy_13548T0
MKQEGSARRRGADKAKPPPGGGEQEPPPPPAPQDVEMKEEAAAGGGSTGETDGKAAAAAAEHSQRELDTVTLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASAPLLPEVEAYLQLLVVIFLMNSKRYKEKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSFP*