Part of scaffold_888 (Scaffold)

For more information consult the page for scaffold_888 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR1D1 ENSTTRG00000016894 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 1, group D, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016017, Bottlenosed dolphin)

Protein Percentage 99.51%
cDNA percentage 98.86%
Ka/Ks Ratio 0.04302 (Ka = 0.0021, Ks = 0.0485)

NR1D1 ENSBTAG00000012178 (Cow)

Gene Details

Nuclear receptor subfamily 1 group D member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016154, Cow)

Protein Percentage 97.39%
cDNA percentage 95.21%
Ka/Ks Ratio 0.06238 (Ka = 0.0123, Ks = 0.1974)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1842 bp    Location:103085..89504   Strand:-
>bmy_13552
ATGACGACCCTGGACTCCAACAACAACACAGGTGGCGTCATCACCTACATCGGCTCCAGCGGCTCCTCCCCAAACCGCACCAGCCCCGAGTCCCTCTACAGTGACAGCTCGAATGGCAGCTTCCAGTCCCTGACCCAAGGCTGTCCCACCTACTTCCCACCATCACCCACTGGCTCCCTCACCCAGGACCCAGCTCGCTCCTTTGGGAGCACTCCACCCAGCTTGGGTGACGATGGTTCCCCTTCTTCTTCATCTTCCTCGTTGTCGTCCTCCTCCTCCTTCTATAACGGGAGCCCCCCCAGGGGTCTACAAGTGGCCCTGGAAGACAGCAACCGAGTGTCCCCCAGCAAGAGCACCAGCAACATCACCAAGCTGAATGGCATGGTGCTACTGTGTAAGGTGTGTGGGGACGTGGCCTCGGGCTTCCACTATGGCGTGCATGCCTGTGAGGGCTGCAAGGGCTTTTTCCGTCGGAGCATCCAGCAGAACATCCAGTACAAAAGGTGTCTGAAAAATGAGAACTGCTCCATCGTCCGCATCAATCGTAACCGCTGCCAGCAGTGTCGCTTCAAGAAGTGTCTCTCCGTGGGCATGTCTCGAGATGCTGTGCGTTTTGGGCGCATCCCCAAACGAGAGAAGCAGCGGATGCTGGCTGAGATGCAGAGTGCCATGAACCTGGCCAACAACCAGCTAAGCAGCCAGTGCCCGCTGGAGACCCCGCCCACCCAGCACCCCACCCCAAGCCCCATGGGCCCCTCACCACCCCCAGCCCCTGCCCCCTCACCCTTGGTGGGCTTCTCCCAGTTCCCACAACAGCTGACGCCTCCCCGATCCCCAAGTCCTGAGCCCACAGTGGAGGATGTGATATCCCAGGTAGCCCGGGCCCACCGAGAGATCTTCACCTACGCCCATGACAAGCTGGGCACCTCACCTGGCAACTTAAATGCCAACCATGCCTCGGGCAACCCTCCAGCCACCACCCCACATCACTGGGAAAGTCAGGGCTGCCCGCCTGCCCCCAATGACAACAACATCATGGCCGCCCAGCGTCATAATGAGGCCCTGAACAGTTTACGCCAGGCTCCCTCCTCTTACCCTCCCACCTGGCCCCCTGGCCCTGCCCATCACAGCTGCCACCAGCCAAACAGCAATGGGCACCATCTGTGCCCCACCCACGTGTACCCAGCCCCAGAAGGCGAAGCACCTGCCAACAGTCTGCGGCAGGGCAACTCCAAGAACGTTCTGCTGGCATGTCCCATGAACATGTACCCGCACGGACGCAGTGGGCGAACTGTGCAGGAGATCTGGGAGGATTTCTCCATGAGCTTCACGCCCGCTGTGAGGGAGGTGGTAGAGTTTGCCAAGCACATCCCTGGCTTCCGTGATCTTTCTCAGCACGACCAGGTCACCCTGCTTAAGGCTGGCACCTTTGAGGTGCTGATGGTACGCTTTGCGTCGCTGTTCAATGTGAAGGACCAGACAGTGATGTTTCTGAGCCGCACCACCTACAGCCTGCAGGAGCTCGGCGCTATGGGCATGGGAGACCTGCTCAATGCCATGTTCGATTTCAGCGAGAAGCTCAACTCCCTGGCGCTTACCGAGGAGGAGCTGGGCCTCTTCACCGCGGTGGTGCTCGTCTCTGCAGACCGCTCGGGCATGGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTGAAGAACCGGCCCTCGGAGACTTCCCGCTTCACCAAGCTGCTGCTCAAGCTGCCGGACCTGCGGACCCTGAACAACATGCATTCCGAGAAGCTGCTGTCCTTCCGGGTGGACGCCCAG

Related Sequences

bmy_13552T0 Protein

Length: 614 aa      View alignments
>bmy_13552T0
MTTLDSNNNTGGVITYIGSSGSSPNRTSPESLYSDSSNGSFQSLTQGCPTYFPPSPTGSLTQDPARSFGSTPPSLGDDGSPSSSSSSLSSSSSFYNGSPPRGLQVALEDSNRVSPSKSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETPPTQHPTPSPMGPSPPPAPAPSPLVGFSQFPQQLTPPRSPSPEPTVEDVISQVARAHREIFTYAHDKLGTSPGNLNANHASGNPPATTPHHWESQGCPPAPNDNNIMAAQRHNEALNSLRQAPSSYPPTWPPGPAHHSCHQPNSNGHHLCPTHVYPAPEGEAPANSLRQGNSKNVLLACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPSETSRFTKLLLKLPDLRTLNNMHSEKLLSFRVDAQ