Part of scaffold_891 (Scaffold)

For more information consult the page for scaffold_891 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPH3A ENSTTRG00000002403 (Bottlenosed dolphin)

Gene Details

rabphilin 3A homolog (mouse)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002251, Bottlenosed dolphin)

Protein Percentage 81.59%
cDNA percentage 84.48%
Ka/Ks Ratio 0.46483 (Ka = 0.0905, Ks = 0.1947)

RPH3A ENSBTAG00000004247 (Cow)

Gene Details

rabphilin-3A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005564, Cow)

Protein Percentage 81.8%
cDNA percentage 84.75%
Ka/Ks Ratio 0.3308 (Ka = 0.123, Ks = 0.3717)

RPH3A  (Minke Whale)

Gene Details

rabphilin 3A homolog (mouse)

External Links

Gene match (Identifier: BACU003444, Minke Whale)

Protein Percentage 89.9%
cDNA percentage 92.08%
Ka/Ks Ratio 0.59725 (Ka = 0.0745, Ks = 0.1248)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location:160291..191829   Strand:+
>bmy_13614
ATGAGGAAGAACGTGGCTGGGGACGGGGTGAACTGCTGCATACTGTGTGGAGAAGAGCTGGGAATGCTGGGCTCTGCCTGTRTAGTGTGTGAGGACTGTAAGAAGAATGTCTGCACCAAGTGTGGGGTGGAGACCTCCAACAGCCGCCCACACCCTGTGTGGCTCTGCAAAATCTGCATCGAGCAGAGAGAGGTGTGGAAGCGCTCTGGAGCATGGTTCTTCAAGGGCTTCCCCAAACAGGTCCTCCCACAGCCTATGCCCATAAAGAAGACCAAGCCCCAGCAGCCAGCCAGTGAGCCCGCTGCCCCTGAGCAGCCCGCCCCTGAGCCCAAACACCCTGCCCGGGCTCCAGCTCAAGGTGACGCTGATGACAGGAGGGGCCCAGGTCAGAAGACAGGCCCTGACCTGGCCTCTGCTCCTGGGCGAGGAAGCTATGGGCCTCCTGTGCGCAGGGCCTCCGAGGCACGAATGAGCTCATCTAGCCGGGACTCAGAGAGCTGGGACCAGAGCCACGGCGGAGCTGCTGGTGACCCCAGCCGGAGCCCAGCAGGTTTGAGACGGGCCAACTCAGTCCAGGCCTCTAGACCCACCCCGGCCTCAGTACAGAGTCCAGCGCCCCCCCAGCCTGGGCAGCCAGGTACGTGCCACCGACCCACCCGCCCAGGCTGTCACTCAGCTAGGTGGCTCCGAGTGACCCCGCCTATACAGGGGCCACCGCCCCACCGCGAGAGGAGAGAACGGGGGGAGTTGGGGGCTATTCGGCAGTTGGAGCCAGGGAGGACCGAGCGGGCCGCCCACTGGGCCCCTGTTCCCAAGCGTCTGCTGCTGCTCCCCAGCCGGCCGCGGCCCCGGCCCGCCAGCCCCCACGCCCACAGGAGGAGGAGGAGGAGGAGGAAGCCAACAGCTATGATTCAGATGAAGCAAGGACTGAAGCCCATGGATTCCAATGGCTTGGCCGATCCCTACGTTAAGCTGCACCTCCTGCCAGGAGCCAGCAAGTCCAACAAGCTTCGTACGAAAACCCTGCGGAACACCCGAAATCCCATCTGGAATGAGACTCTGGTCTATCATGGCATCACGGATGAGGACATGCAGAGGAAGACCCTCAGATTCTCGCTCAAAAAATTGAAGCCCAACCAGAGGAAGAACTTCAATATCTGTCTGGAGCGGGTGATCCCGATGAAGCGTGCTGGAACCACCGGGTCAGCCCGAGGCATGGCCCTTTATGAGGAGGAGCAGGTGGAGCGTATTGGTGACACAGAGGAACGCGGCAAGATCCTGGTGTCCCTCATGTACAGCACACAGCAGGGAGGCCTCATTGTGGGCATCATACGCTGCGTGCACCTGGCGGCCATGGACGCCAATGGCTACTCAGATCCATTCGTCAAGCTCTGGCTGAAACCAGATATGGGAAAGAAAGCCAAACATAAGACTCAAATTAAGAAGAAAACCTTGAATCCTGAATTTAATGAGGAATTTTTCTATGACATCAAACATAGTGACCTGGCGAAGAAGTCACTGGACATCTCAGTCTGGGACTATGACATTGGCAAATCCAATGATTACATCGGAGGCTGCCAGCTGGGGATCTCAGCCAAGGGAGAGCGCTTAAAACACTGGTACGAGTGTCTGAAAAACAAGGACAAGAGGATCGAACGCTGGCACCAGCTACAGAATGAGAACCACGTGTCAAGCGATTAG

Related Sequences

bmy_13614T0 Protein

Length: 567 aa      View alignments
>bmy_13614T0
MRKNVAGDGVNCCILCGEELGMLGSACXVCEDCKKNVCTKCGVETSNSRPHPVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPASEPAAPEQPAPEPKHPARAPAQGDADDRRGPGQKTGPDLASAPGRGSYGPPVRRASEARMSSSSRDSESWDQSHGGAAGDPSRSPAGLRRANSVQASRPTPASVQSPAPPQPGQPGTCHRPTRPGCHSARWLRVTPPIQGPPPHRERRERGELGAIRQLEPGRTERAAHWAPVPKRLLLLPSRPRPRPASPHAHRRRRRRRKPTAMIQMKQGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDTEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKRIERWHQLQNENHVSSD*