Part of scaffold_891 (SequenceType object (1))

For more information consult the page for scaffold_891 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPH3AENSTTRG00000002403 (Bottlenosed dolphin)

Gene Details

rabphilin 3A homolog (mouse)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002251, Bottlenosed dolphin)

Protein Percentage 81.59%
cDNA percentage 84.48%
Ka/Ks Ratio 0.46483 (Ka = 0.0905, Ks = 0.1947)

RPH3AENSBTAG00000004247 (Cow)

Gene Details

rabphilin-3A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005564, Cow)

Protein Percentage 81.8%
cDNA percentage 84.75%
Ka/Ks Ratio 0.3308 (Ka = 0.123, Ks = 0.3717)

RPH3A (Minke Whale)

Gene Details

rabphilin 3A homolog (mouse)

External Links

Gene match (Identifier: BACU003444, Minke Whale)

Protein Percentage 89.9%
cDNA percentage 92.08%
Ka/Ks Ratio 0.59725 (Ka = 0.0745, Ks = 0.1248)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1701 bp    Location:160291..191829   Strand:+
>bmy_13614
ATGAGGAAGAACGTGGCTGGGGACGGGGTGAACTGCTGCATACTGTGTGGAGAAGAGCTGGGAATGCTGGGCTCTGCCTGTRTAGTGTGTGAGGACTGTAAGAAGAATGTCTGCACCAAGTGTGGGGTGGAGACCTCCAACAGCCGCCCACACCCTGTGTGGCTCTGCAAAATCTGCATCGAGCAGAGAGAGGTGTGGAAGCGCTCTGGAGCATGGTTCTTCAAGGGCTTCCCCAAACAGGTCCTCCCACAGCCTATGCCCATAAAGAAGACCAAGCCCCAGCAGCCAGCCAGTGAGCCCGCTGCCCCTGAGCAGCCCGCCCCTGAGCCCAAACACCCTGCCCGGGCTCCAGCTCAAGGTGACGCTGATGACAGGAGGGGCCCAGGTCAGAAGACAGGCCCTGACCTGGCCTCTGCTCCTGGGCGAGGAAGCTATGGGCCTCCTGTGCGCAGGGCCTCCGAGGCACGAATGAGCTCATCTAGCCGGGACTCAGAGAGCTGGGACCAGAGCCACGGCGGAGCTGCTGGTGACCCCAGCCGGAGCCCAGCAGGTTTGAGACGGGCCAACTCAGTCCAGGCCTCTAGACCCACCCCGGCCTCAGTACAGAGTCCAGCGCCCCCCCAGCCTGGGCAGCCAGGTACGTGCCACCGACCCACCCGCCCAGGCTGTCACTCAGCTAGGTGGCTCCGAGTGACCCCGCCTATACAGGGGCCACCGCCCCACCGCGAGAGGAGAGAACGGGGGGAGTTGGGGGCTATTCGGCAGTTGGAGCCAGGGAGGACCGAGCGGGCCGCCCACTGGGCCCCTGTTCCCAAGCGTCTGCTGCTGCTCCCCAGCCGGCCGCGGCCCCGGCCCGCCAGCCCCCACGCCCACAGGAGGAGGAGGAGGAGGAGGAAGCCAACAGCTATGATTCAGATGAAGCAAGGACTGAAGCCCATGGATTCCAATGGCTTGGCCGATCCCTACGTTAAGCTGCACCTCCTGCCAGGAGCCAGCAAGTCCAACAAGCTTCGTACGAAAACCCTGCGGAACACCCGAAATCCCATCTGGAATGAGACTCTGGTCTATCATGGCATCACGGATGAGGACATGCAGAGGAAGACCCTCAGATTCTCGCTCAAAAAATTGAAGCCCAACCAGAGGAAGAACTTCAATATCTGTCTGGAGCGGGTGATCCCGATGAAGCGTGCTGGAACCACCGGGTCAGCCCGAGGCATGGCCCTTTATGAGGAGGAGCAGGTGGAGCGTATTGGTGACACAGAGGAACGCGGCAAGATCCTGGTGTCCCTCATGTACAGCACACAGCAGGGAGGCCTCATTGTGGGCATCATACGCTGCGTGCACCTGGCGGCCATGGACGCCAATGGCTACTCAGATCCATTCGTCAAGCTCTGGCTGAAACCAGATATGGGAAAGAAAGCCAAACATAAGACTCAAATTAAGAAGAAAACCTTGAATCCTGAATTTAATGAGGAATTTTTCTATGACATCAAACATAGTGACCTGGCGAAGAAGTCACTGGACATCTCAGTCTGGGACTATGACATTGGCAAATCCAATGATTACATCGGAGGCTGCCAGCTGGGGATCTCAGCCAAGGGAGAGCGCTTAAAACACTGGTACGAGTGTCTGAAAAACAAGGACAAGAGGATCGAACGCTGGCACCAGCTACAGAATGAGAACCACGTGTCAAGCGATTAG

Related Sequences

bmy_13614T0 SequenceType object (3)

Length: 567 aa      View alignments
>bmy_13614T0
MRKNVAGDGVNCCILCGEELGMLGSACXVCEDCKKNVCTKCGVETSNSRPHPVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPASEPAAPEQPAPEPKHPARAPAQGDADDRRGPGQKTGPDLASAPGRGSYGPPVRRASEARMSSSSRDSESWDQSHGGAAGDPSRSPAGLRRANSVQASRPTPASVQSPAPPQPGQPGTCHRPTRPGCHSARWLRVTPPIQGPPPHRERRERGELGAIRQLEPGRTERAAHWAPVPKRLLLLPSRPRPRPASPHAHRRRRRRRKPTAMIQMKQGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDTEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKRIERWHQLQNENHVSSD*