Part of scaffold_906 (Scaffold)

For more information consult the page for scaffold_906 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMPRSS2 ENSTTRG00000000684 (Bottlenosed dolphin)

Gene Details

transmembrane protease, serine 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000643, Bottlenosed dolphin)

Protein Percentage 94.0%
cDNA percentage 95.68%
Ka/Ks Ratio 0.30385 (Ka = 0.029, Ks = 0.0953)

TMPRSS2 ENSBTAG00000009132 (Cow)

Gene Details

transmembrane protease serine 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012036, Cow)

Protein Percentage 85.27%
cDNA percentage 87.17%
Ka/Ks Ratio 0.17278 (Ka = 0.075, Ks = 0.4343)

TMPRSS2  (Minke Whale)

Gene Details

transmembrane protease, serine 2

External Links

Gene match (Identifier: BACU004405, Minke Whale)

Protein Percentage 96.9%
cDNA percentage 97.53%
Ka/Ks Ratio 0.19758 (Ka = 0.0127, Ks = 0.0645)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1275 bp    Location:305010..328647   Strand:+
>bmy_13633
ATGGCTTTAAACTCAGGATCACCACCAGGTGTCGGGCCTTACTATGAGAACCACGGATTCCAACCCGAAAGCCTCTACCCTCCACAGCCGCCCATGGCCCACCGTGCCTACACGGGGTACCCGGCTCGGTACTACCCGCCCGCGGTGCCCCAGTACACCCCGAGGGTTCAGACGCACACCTCGACACCCGTCATCCTCATGCAGCCCAAACCCCCGTCGGGGATAGCATGCACCTCAAGGACTAAGAAAGTCCTGTGTGTCACCTTCACCCTGGGGGCCCTGCTGGCGGGAGCAGTCCTGGCTGCGGTGCTGCTGTGGAAGCTCTTGGAGGACCAGTGCTTGGGGATGGAATGCAGCTCCTTGGGGACCTGCGTCAGCCCCTCTCACTGGTGCGACGGCATCCTGCACTGCCCCGGCGGCGAGGACGAGAACCGGTGCGTTCGTCTCTACGGACCCAACTTCATCCTTCAGGTGTACTCAGCTCAGAGGAAGTCCTGGCACCCCGTGTGCCAGGATGACTGGAGTGACAACTACGGGAGAGCAGCGTGCCAGGACATGGGCTACCCTGATGTCTGTTCTTCAAAAACAGTGGTTTCTTTACGCTGTATAGAGTGCGGGGTCTYGGGGAAGACGAGACGCCAGAGCCGGATCGTGGGCGGGTCGAGCGCTGCCCCGGGGGACTGGCCCTGGCAGGTCAGCCTGCACGTGCAGGGCACCCACGTCTGCGGAGGCTCCATCATCACCCCCGAGTGGATTGTGACCGCCGCCCACTGCGTGGAGCAACCTCTTAACAATCCCAAGATTTGGACGGCCTTTGCAGGAATTTTGAGACAATCTTTCATGTTCTATGGAAACGGATACCGAGTAGCAAAAGTGATTTCCCACCCAAATTACGATTCCAAGACCAAGAACAACGACATCGCTCTTTTGAAGCTGCAGACGCCTCTGACTTTTAACGGGAAAACCTCGGACGGGCTGAACGCGGCGATGGTACAGCTCATCGAGCCCTGGCGGTGCGACAGCAAGCACGTGTACGGCGACCTTATCATGCCGGCCATGATCTGCGCGGGGTACCTGCAGGGAACCGTTGACTCCTGCCAGGGTGACAGCGGAGGCCCTCTGGTCACTCTGAAGAGCAGCATCTGGTGGCTGATCGGGGACACRAGCTGGGGGTCTGGCTGTGCTAAGGCTTACCGACCGGGAGTGTACGGAAACGTGACCGTGTTTACAGACTGGATTTATCAACAAATGAGGGTAACTTTCCCGTCCTCCTGA

Related Sequences

bmy_13633T0 Protein

Length: 425 aa      View alignments
>bmy_13633T0
MALNSGSPPGVGPYYENHGFQPESLYPPQPPMAHRAYTGYPARYYPPAVPQYTPRVQTHTSTPVILMQPKPPSGIACTSRTKKVLCVTFTLGALLAGAVLAAVLLWKLLEDQCLGMECSSLGTCVSPSHWCDGILHCPGGEDENRCVRLYGPNFILQVYSAQRKSWHPVCQDDWSDNYGRAACQDMGYPDVCSSKTVVSLRCIECGVXGKTRRQSRIVGGSSAAPGDWPWQVSLHVQGTHVCGGSIITPEWIVTAAHCVEQPLNNPKIWTAFAGILRQSFMFYGNGYRVAKVISHPNYDSKTKNNDIALLKLQTPLTFNGKTSDGLNAAMVQLIEPWRCDSKHVYGDLIMPAMICAGYLQGTVDSCQGDSGGPLVTLKSSIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDWIYQQMRVTFPSS*