Sequence detailsbmy_13686 (Coding sequence)

Part of scaffold_925 (SequenceType object (1))

For more information consult the page for scaffold_925 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCG2ENSBTAG00000021588 (Cow)

Gene Details

Secretogranin-2 Secretoneurin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028766, Cow)

Protein Percentage 93.15%
cDNA percentage 94.51%
Ka/Ks Ratio 0.27631 (Ka = 0.033, Ks = 0.1194)

SCG2 (Minke Whale)

Gene Details

secretogranin II

External Links

Gene match (Identifier: BACU001406, Minke Whale)

Protein Percentage 98.54%
cDNA percentage 98.81%
Ka/Ks Ratio 0.22904 (Ka = 0.0055, Ks = 0.024)

Additional orthologs identified in other species via the OPTIC pipeline.

SCG2 (Human)   Scg2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1926 bp    Location:50472..78170   Strand:+
Raw sequence 
>bmy_13686
ATGCCTCTCCAAACCCCCAGACCCTCTCAACAAGTCATTGATGCCTTTAACCTACAGACCGGAAATCTTTCAAACATGGCAGAAGCTAAGACTCACTGGCTTGGAGCAGCCCTGTCTCTCATCCCTTTAATTTTCCTCCTCTCTGAGGCCGAAGCAGCTTCATTTCAGAGAAACCAGCTGCTTCAGAAGGAACCAGATATCAGATTGGAAAATGTCCAAAGGTTTCCCAGTCCTGAAATGATCAGGGCTTTGGAGTACATAGAAAAGCTCCGACAACAAGCTCACAAAGAAGAAAGCAGCCTAGACTACAATCCCTACCAAGGTGTCTCTGTTCTCCTTCAGCAAAAAGAAAATGGTGACTTGCCAGAAAGTTCAAGGGATTCCCTGAGTGAAGATGAGTGGATGAAGATAATACTTGAAGCTTTGAGACAGGCTGAAAATGAGCCCCAGTCTGCACCAAAAGAAAACAAGCCCTATACCTTGAATTCAGAAAAGAACTTTCCAATRGACATGCCTGATGATTATGAGACTCAACAGTGGCYGGAGAGAAAGCTCAAGCACATGAGATTCCCTCCTATATATGAAGAGAATTCCAGGGACAACCCCTTTAAACGCACAAATGAAATAGTAGAGGAACAATATACTCCTCAAAGCCTTGCTACGTTGGAATCTGTCTTCCAAGAGCTGGGGAAACTGACGGGACCAAACAACCAGAAGCGTGAGAGGGTTGATGAGGAGCAAAAACTTTACACAGATGATGAAGATGATATCTACAAGGCTAATAACATTGCCTATGAAGACGTGGTTGGGGGAGAAGATTGGAACCCAGTAGAGGAAAAAATAGAGAGTCAAACCCAGGAAGAGGTAAGAGACAGCAAAGAGAATATAGAAAAAAATGAACAAATCAATGATGAAATGAAGCGTTCAGGGCAGCTGGGCCTCCAGGATGAAGATTTCCAGAAAGAGAGTAAAGACCAACTCTCAGATGATGTCTCCAAAGTAATTGCCTATCTGAAAAGGTTAGTGAATGCTGCAGGAAGTGGGAGGTCACAGAATGGGCAAAACGGGGAAAGAGCAACCAGGCTTTTTGAGAAACCACTTGATTCTCAATCTATTTATCAGCTGATTGAAATCTCAAGGAATTTACAAATACCCCCTGAAGACTTAATTGACATGCTCAAAACTGGGGAGAAGCCAAATGTATCAGTGGAACCAGAGCAGGAGCTTGAAATTCCCTTTGACCCTGAAGACATCTCAGAGGTTGACTTAGACCATCCAGATCTGTTCCAAAATAAGATGCTCTCCAAGAATGGCTACCCCAAAACACCTGGTCGTGCTGTGGCAGAGGCTCTACCAGATGGGCTCAGTGTTGAGGACATTTTAAATCTTTTAGGGATGGAAAATGCAGCAAATCAAAAGCCTCCATATTTTCCCAATCAGTATAACCAAGAGAAGGTTCTGTCAAGACTCCCCTATGGTCCTGGAAGGTCTAAAGCAAACCAACTTCCCAAAGCTGTCTGGATGCCAGATGTTGAAAACAGACAAATGGCATATGAAAACCTGAATGACAAGGATCAAGAATTAGGGGAGTACTTGGCCAAGATGCTAGTTAAATACCCTGAGATCATGAATTCAAACCAAGTGAAGCGAGTTCCCAGTCAAGGCTCATCTGAAGATGATCTACAGGAAGAGAACCAAATCGAGCAGGCCCTCAAAGAACGTTTGAATCAACACAGCTCTCAGGAGACTGACAAACTGGCCTCGGTAAGCAAAAGGCTCCCTGTGGGGTCCCCAAAGAATGATGATACCCCCAACAGACAGTACTTGGATGAAGATCTGTTAATGAAAGTGCTGGAATACCTCAACCAAGAAAAGGCAGAAAAGGGAAGGGAGCATATTGCTAAGAGAGCAATGGAAAATATGTAA

Related Sequences

bmy_13686T0 SequenceType object (3)

Length: 642 aa      View alignments
>bmy_13686T0
MPLQTPRPSQQVIDAFNLQTGNLSNMAEAKTHWLGAALSLIPLIFLLSEAEAASFQRNQLLQKEPDIRLENVQRFPSPEMIRALEYIEKLRQQAHKEESSLDYNPYQGVSVLLQQKENGDLPESSRDSLSEDEWMKIILEALRQAENEPQSAPKENKPYTLNSEKNFPXDMPDDYETQQWXERKLKHMRFPPIYEENSRDNPFKRTNEIVEEQYTPQSLATLESVFQELGKLTGPNNQKRERVDEEQKLYTDDEDDIYKANNIAYEDVVGGEDWNPVEEKIESQTQEEVRDSKENIEKNEQINDEMKRSGQLGLQDEDFQKESKDQLSDDVSKVIAYLKRLVNAAGSGRSQNGQNGERATRLFEKPLDSQSIYQLIEISRNLQIPPEDLIDMLKTGEKPNVSVEPEQELEIPFDPEDISEVDLDHPDLFQNKMLSKNGYPKTPGRAVAEALPDGLSVEDILNLLGMENAANQKPPYFPNQYNQEKVLSRLPYGPGRSKANQLPKAVWMPDVENRQMAYENLNDKDQELGEYLAKMLVKYPEIMNSNQVKRVPSQGSSEDDLQEENQIEQALKERLNQHSSQETDKLASVSKRLPVGSPKNDDTPNRQYLDEDLLMKVLEYLNQEKAEKGREHIAKRAMENM*