Part of scaffold_919 (Scaffold)

For more information consult the page for scaffold_919 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RHBDF2 ENSTTRG00000015926 (Bottlenosed dolphin)

Gene Details

rhomboid 5 homolog 2 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015092, Bottlenosed dolphin)

Protein Percentage 82.88%
cDNA percentage 85.16%
Ka/Ks Ratio 0.19125 (Ka = 0.0628, Ks = 0.3285)

RHBDF2 ENSBTAG00000003436 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004463, Cow)

Protein Percentage 81.79%
cDNA percentage 84.08%
Ka/Ks Ratio 0.12799 (Ka = 0.1081, Ks = 0.845)

RHBDF2  (Minke Whale)

Gene Details

rhomboid 5 homolog 2 (Drosophila)

External Links

Gene match (Identifier: BACU011543, Minke Whale)

Protein Percentage 85.96%
cDNA percentage 90.07%
Ka/Ks Ratio 0.26414 (Ka = 0.0801, Ks = 0.3033)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1755 bp    Location:109181..118750   Strand:+
>bmy_13775
ATGGCCTCCGCTGACAAGAATGGCGAGAGCGTCTCCTCGGTGTCCAGTAGCCGCCTGCAGAGCCGGAAGCCACCCAACCTATCCATCACCATCCCTCTGCCTGAGACCCCGGCCCCCAGCGAGCAGGCCAGCATGCTGCCCCAGGTAAGGGAGCAGCTGGGCGCTCGCCGCCCTGCCATCAGCCACCGCTGTGCCCCCATGGCACCTTTCGGGCAGTTTCACTTCCCGGAGGAGGGCCTTCTGGAGCCACAGCTGCCCTGTGGCCCTGCTGGGCGCTCGGTACTGGATGCCACAGGACAGCAGTGCCGGGTGGTCAAGCGCAGCTTTGCCTACCCCAGCTTCCTGGAGGAGGATGCGGAAGAAATGAGCTCCGTGCCTGATGATGTGTTTGAGTCGCCCCCACTCTCTGCCAGCTACTTCCGGGGCATCCCACGCTCGGCCTCCCCGGTCTCCCCCGAAGAGGTGCAGATCCCTCTGAGGGAGTCTGACCGAGCCCCGGTGCCCGCGGCCAAACGCGGCAAGCGTATCGCATTCAAGGTGAAGCACTTTGCCTTGGACCGGAAGAAGCGGCACTACGGCCTGGGCGTTGTGGGCAACTGGCTGAACCGCAGCTACCGCCGCAGCATCAGCAGCACCGTGCAGCGCCAGCTGGAGAGCTTCGACAGCCACCGGCCCTACTTCACCTACTGGCTGACGTTCGTCCACATCATCATCACGCTGCTGGTGATTTGCACGTACGGCATCGCGCCTGTGGGCTTCGCCCAGCACGTCACCACCGAGCTGGTACTCAGGAACAAAGGTGTGTATGAGAGCGTGAAGTGCATCCAGCAGGAGAACTTCTGGATTGGCCCCAGCTCGATTGACTTGATCCACCTGGGAGCCAAGTTCTCGCCCTGCATCCGGAAGGACCAGCAGATCAAGCAGCTCGTGCTGCGGGAGCGAGAGCTGGAGCGGGACTCGGGCTGCTGTGTCCAGAACGACCACTCGGGCTGCATCCAGACGCAGGAGCAGGACTGCTCGGGCCTCGGACCCAGCCGGATCCCAGGCACTGACTGCCATGCTCTCACCCACAGGTGCACTGCTTGGACAAGGTGTGTGGGCTGCTGCCCTTCCTCAATCCTGAGGTCCCAGATCAGTTCTACAGGCTCTGGCTGTCTCTGTTCCTTCACGCTGGGTAAGAGCGTGGTGCACTGCCTCGTGTCTGTGATCTTCCAAATGACCATCCTGCGGGACCTGGAGAAGCTGGCCGGCTGGCACCGCATCGCCATCATCTTCATCCTCAGCGGCATCACCGGCAACCTCGCCAGTGCCATCTTCCTCCCGTACCGCGCAGAGGTGGGCCCGGCAGGGTCGCAGTTCGGCCTCCTGGCCTGCCTCTTCGTGGAGCTCTTCCAGAGCTGGCAGCTGCTGGAGCGGCCCTGGAAGGCCTTCCTGAACCTGTCGGCCATCGTGCTCTTCCTGTTCATCTGCGGCCTCCTGCCCTGGATCGACAACATTGCCCACATCTTTGGCTTCCTCAGCGGCCTGCTGCTGGCCTTCGCCTTCCTGCCCTACATCACCTTCGGCACGAGTGACAAGTACCGCAAGCGCGCCCTCATCCTTGTGTCGCTGCTGGTCTTCGCCGGCCTCTTCACCTCGCTGGTCATCTGGCTCTACGTCTACCCCATCCACTGGCCCTGGATCGAGTACCTCACCTGCTTTCCCTTCACCAGCCGCTTCTGCGAGAAGTACGAGCTGGTCCAGGTGCTGCACTGA

Related Sequences

bmy_13775T0 Protein

Length: 585 aa      View alignments
>bmy_13775T0
MASADKNGESVSSVSSSRLQSRKPPNLSITIPLPETPAPSEQASMLPQVREQLGARRPAISHRCAPMAPFGQFHFPEEGLLEPQLPCGPAGRSVLDATGQQCRVVKRSFAYPSFLEEDAEEMSSVPDDVFESPPLSASYFRGIPRSASPVSPEEVQIPLRESDRAPVPAAKRGKRIAFKVKHFALDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHIIITLLVICTYGIAPVGFAQHVTTELVLRNKGVYESVKCIQQENFWIGPSSIDLIHLGAKFSPCIRKDQQIKQLVLRERELERDSGCCVQNDHSGCIQTQEQDCSGLGPSRIPGTDCHALTHRCTAWTRCVGCCPSSILRSQISSTGSGCLCSFTLGKSVVHCLVSVIFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSGLLLAFAFLPYITFGTSDKYRKRALILVSLLVFAGLFTSLVIWLYVYPIHWPWIEYLTCFPFTSRFCEKYELVQVLH*