Part of scaffold_919 (Scaffold)

For more information consult the page for scaffold_919 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPHK1 ENSTTRG00000015923 (Bottlenosed dolphin)

Gene Details

sphingosine kinase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015089, Bottlenosed dolphin)

Protein Percentage 90.27%
cDNA percentage 91.97%
Ka/Ks Ratio 0.48696 (Ka = 0.0703, Ks = 0.1444)

SPHK1 ENSBTAG00000008507 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011212, Cow)

Protein Percentage 85.31%
cDNA percentage 88.01%
Ka/Ks Ratio 0.1978 (Ka = 0.0759, Ks = 0.3838)

SPHK1  (Minke Whale)

Gene Details

sphingosine kinase 1

External Links

Gene match (Identifier: BACU020380, Minke Whale)

Protein Percentage 96.15%
cDNA percentage 97.14%
Ka/Ks Ratio 0.33015 (Ka = 0.0201, Ks = 0.0608)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1434 bp    Location:192752..188554   Strand:-
>bmy_13778
ATGCTTGGCTGCCCAGTGCGGATGGGGACCCCTAGGCCTGTTTACACCGCCAAGCTCCTCTCAGATCCGGCAACCGCAGGGAATGACGCGGGTGCCCCTACAGCCCCGGCTCCGGGCGGGGAGGGCGAGCCCCACAGCCGGCACCAAGACGCCCGCCTGGGCAGCACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCGCGGACAGCGCCCCGACAGCGCCGGGGACCCCCTGGCAGCGGGGGCCTCGGGTCGCGGTTATGGATGCAGCGGGCGGCTCCCGGAACCCGCTCCCAAGGCCCTGCCGAGTGCTGGTGCTGTTAAATCCACGCGGGGGCAAGGGCAAAGCCCTGCAGCTCTTCCGGAGCCACGTGCAGCCCCTGCTGGCCCAGGCCGATGTCTCCTTCACGCTGACGCTCACTGAGCGGCGGAACCACGCCCGGGAGCTGGTGCGGGCGGAGGACCTGAGACGTTGGGACGCGCTGGTGGTCATGTCTGGAGACGGGTTGATGCATGAGGTGGTGAACGGGCTCATGGAGCGGCCTGACTGGGAGACCGCCATCCAGAAGCCCCTGTGCAGCCTCCCAGCCGGCTCTGGCAATGCACTGGCCGCTTCTGTGAACCATTATGCCGGCTACGAGCAGGTGACTAATGAAGACCTCCTGACCAACTGCACACGGCTGCTGTGCCGCCGGCTGCTGGCGCCCATGGATCTGCTGTCCCTGCAAATGGCCTCCGGGCAGCGCCTCTTCTCCGTGCTCAGCCTGGCTTGGGGTTTCATCGCTGACGTGGATCTGGAGAGTGAGAAGTTTCGGCGCCTGGGTGAGATGCGCTTCACTCTGGGCACCTTCCTGCGCCTGGCGGCCCTGCGCACCTACCAGGGCTCCCTGGCCTACCTCCCTGTAGAAACGGTGGTCTCCAAGATGCCCCCCTGCCCCGCTCGGGACCAGCAGGCCCAGCAGGGCCCTGTGGACGCCCACCTGGTGCCCCTGGAGGAGGCAGTGCCCTCTCACTGGACAGTGGTGCCAGAGCAGGACTTCGTGCTGGTGCTGGCACTGCTGCACTCACACCTGGGCAGCGAGATGTTTGCTGCACCGATGGGCCGCTGTGCGGCCGGCGCTATGCATCTGTTCTACGTGCGGGCAGGTGTGTCGCGGGCCACACTGCTGCGCCTCTTCCTGGCCATGGAGAAAGGCAGGCACATGGCGTATGACTGTCCCCACTTGGTGTATGTGCCCGTGGTTGCTTTCCGCCTGGAACCCAAGGACAGGAAGGGTGTGTTTGCTGTGGATGGGGAACTGATGATCAGCGAGGCTGTGCAGGGCCAGGTGCACCCAAACTACTTCTGGATGGTCAGTGGCTGCAGGGAGTCCCCACCCTCTCTGGAGCCACAGGCCTCACCCAGCCGGAGGCCACCTCCAGCGGAGCACTTATGA

Related Sequences

bmy_13778T0 Protein

Length: 478 aa      View alignments
>bmy_13778T0
MLGCPVRMGTPRPVYTAKLLSDPATAGNDAGAPTAPAPGGEGEPHSRHQDARLGSTDKELKAGAAAADSAPTAPGTPWQRGPRVAVMDAAGGSRNPLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAQADVSFTLTLTERRNHARELVRAEDLRRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASVNHYAGYEQVTNEDLLTNCTRLLCRRLLAPMDLLSLQMASGQRLFSVLSLAWGFIADVDLESEKFRRLGEMRFTLGTFLRLAALRTYQGSLAYLPVETVVSKMPPCPARDQQAQQGPVDAHLVPLEEAVPSHWTVVPEQDFVLVLALLHSHLGSEMFAAPMGRCAAGAMHLFYVRAGVSRATLLRLFLAMEKGRHMAYDCPHLVYVPVVAFRLEPKDRKGVFAVDGELMISEAVQGQVHPNYFWMVSGCRESPPSLEPQASPSRRPPPAEHL*