Part of scaffold_919 (Scaffold)

For more information consult the page for scaffold_919 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM47 ENSTTRG00000015893 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 47

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015059, Bottlenosed dolphin)

Protein Percentage 73.95%
cDNA percentage 75.98%
Ka/Ks Ratio 0.22344 (Ka = 0.0763, Ks = 0.3414)

TRIM47 ENSBTAG00000018920 (Cow)

Gene Details

tripartite motif-containing protein 47

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025190, Cow)

Protein Percentage 90.15%
cDNA percentage 88.47%
Ka/Ks Ratio 0.08961 (Ka = 0.0571, Ks = 0.6377)

TRIM47  (Minke Whale)

Gene Details

tripartite motif containing 47

External Links

Gene match (Identifier: BACU011526, Minke Whale)

Protein Percentage 64.32%
cDNA percentage 73.18%
Ka/Ks Ratio 0.51655 (Ka = 0.3044, Ks = 0.5893)

Genome Location

Sequence Coding sequence

Length: 1437 bp    Location:586923..591748   Strand:+
>bmy_13801
ATGGACGGCAGCGGCCCCTTCAGCTGCCCCATCTGCCTGGAGCCGCTCCGGGAGCCAGTGACGCTGCCCTGCGGCCACAACTTCTGCCTCGCCTGCCTGGGCGCGCTCTGGCCGCACCGCGGCGTGGGTGGCGCCGGCGGGCCGGGAGGCACGGCCCGCTGCCCGCTGTGCCAGGAGCCCTTCCCCGACGGCCTGCAGCTCCGCAAGAACCACACGCTGTCCGAGCTGCTGCAGCTCCGCCAGGGCTCGGGCCCGGGGCCCGGCCCCGGCCCGGCCCGGGCCCCCGAGCCGGTGGCGCCCAGTGCGCCGCCCAGCGCCCCGGAGCCGTCGGCTCCCTGCGCGCCGGAGCCGTGGCCGGCGGGCGAAGAGCCGGTGCGCTGCGACGCGTGCCCCGAGGGCGCCGCCCTACCCGCCGCGCTCTCCTGCCTCTCCTGCTTCGCCTCCTTCTGCCCCGCGCATCTAGGCCCGCACGAGCGCAGCCCCGCGCTGCGCGGACACCGCCTGGTGCCGCCGCTGCGCCGGCTGGAGGAGAGCCTGTGTCCGCGCCACCTGCGGCCGCTCGAGCGCTACTGCCGCGCGGAGCGAGTGTGCCTGTGTGAGGCCTGTGCCGCCCAGGAGCACCGGGGCCACGAGCTCGTGCCGCTGGAGCAGGAGCGCGCGCTCCAGGAGGTGGGGCGCGGGCGCGGCGGGCTGGCGGGCGGGCGACGGGCCTCGCGCCGAGCAGCCCAAAGTCCTGAGTGCTGTGGAGGACCGCATGGACGAGCTGGGAGCGGGCATCGCACAGTCCCGGCGCACGTTGCCTACATTGTGGACCTGGACAGCGACACGGCAGACAAGTTCCTGCAGCTGTTTGGAACCAAGGGTGTGAAGAGGGTGCTGTGTCCCATCAACTACCCCGAGTCGCCCACCCGCTTCACCCACTGCGAGCAGGTGCTGGGCGAGGGTGCCCTGGACCGGGGCACCTACTACTGGGAGGTGGAGATCATTGAGGGCTGGGTCAGCGTGGGAGTTATGGCCGAAGACTTCTCCCCACAAGAGCCCTACGACCGGGGCCGGCTTGGACGCAATGCTCACTCCTGCTGCCTGCAGTGGAACGGACGCAGCTTCTCCGTCTGGTTCCACGGGCTGGAGGTGCTCCTGCCCCACCCCTTCTCGCCCACCGTCGGGATCTGCCTGGAATATGCTGACCGAGCCCTGGCCTTCTACGCCGTGCGGGATGGCAAGATGAGCCTTCTGCGGAGGCTGAAGTCCTCCCGGGCCCGCCGGTGTGGCACCCCAGCCTCCCCGGTTGACCCCTTCCAGAGCCGCCTGGACAGCCACTTTGCGGGGCTCTTCACACACAGGCTCAAGCCYGCCTTCTTCCTGGAGAGCGTGGATGCCCATCTGCAGATCGGGCCCCTCAAGAAGTCCTGCATATCCGTGCTGAAGAGGAGGTGA

Related Sequences

bmy_13801T0 Protein

Length: 479 aa      View alignments
>bmy_13801T0
MDGSGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHRGVGGAGGPGGTARCPLCQEPFPDGLQLRKNHTLSELLQLRQGSGPGPGPGPARAPEPVAPSAPPSAPEPSAPCAPEPWPAGEEPVRCDACPEGAALPAALSCLSCFASFCPAHLGPHERSPALRGHRLVPPLRRLEESLCPRHLRPLERYCRAERVCLCEACAAQEHRGHELVPLEQERALQEVGRGRGGLAGGRRASRRAAQSPECCGGPHGRAGSGHRTVPAHVAYIVDLDSDTADKFLQLFGTKGVKRVLCPINYPESPTRFTHCEQVLGEGALDRGTYYWEVEIIEGWVSVGVMAEDFSPQEPYDRGRLGRNAHSCCLQWNGRSFSVWFHGLEVLLPHPFSPTVGICLEYADRALAFYAVRDGKMSLLRRLKSSRARRCGTPASPVDPFQSRLDSHFAGLFTHRLKPAFFLESVDAHLQIGPLKKSCISVLKRR*