Part of scaffold_919 (Scaffold)

For more information consult the page for scaffold_919 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGB4 ENSTTRG00000015887 (Bottlenosed dolphin)

Gene Details

integrin, beta 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015053, Bottlenosed dolphin)

Protein Percentage 93.03%
cDNA percentage 94.26%
Ka/Ks Ratio 0.19106 (Ka = 0.0231, Ks = 0.121)

ITGB4 ENSBTAG00000018169 (Cow)

Gene Details

Integrin beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040201, Cow)

Protein Percentage 91.73%
cDNA percentage 90.69%
Ka/Ks Ratio 0.08021 (Ka = 0.0411, Ks = 0.5127)

ITGB4  (Minke Whale)

Gene Details

integrin, beta 4

External Links

Gene match (Identifier: BACU011521, Minke Whale)

Protein Percentage 97.44%
cDNA percentage 97.97%
Ka/Ks Ratio 0.18426 (Ka = 0.0123, Ks = 0.0668)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5469 bp    Location:716438..686301   Strand:-
>bmy_13808
CATAAAGCGGTCGCCTCCCAGCCCATAAAGCGGTCCCCTCCCCGCCGCCGCCCGCCCTCCCTGCAGCCCGCCCTCCGGACACTCCCGGCTCGCCCGCGCGCCGCATCCGGAGCCGCCGAGCGGAGCCCAGCGCGGGGAGGGCGCGAGTCAGCCCCAAGGAGGAAGAGGATGGCAGGGCCGCACCCCAGCTGGTGGACCAGGCTGCTGCTGGCAGCCCTGCTGAGCGTCAGCTTCCCCGGGGACATGGCGAACCGCTGCAAGAAGGCCCAGGTGACGAGCTGCACCGAGTGCATCCGCGTGGCCAAGCACTGCGCCTACTGCACGGACGAGATGTTCAAGGAATGGCGCTGCAACACCCAGGCAGAGCTGCTGGCTGCGGGCTGCCGGCAGGAGAGCATGGTGGTCATGGAGAGCAGCTTCGAGATCACAGAGGAAACGGAGATCGACACCACCCTGCACCGCAGCCAGGTGTCCCCCCAGGGGCTGCGGGTGCGGCTGCGGCCGGGAGAGGAGTGGCACTTTGAGCTGCAGGTGTTTGAGCCCCTGGAGAGCCCCATGGACCTGTATATCCTCATGGACTTCTCCAACTCCATGTCTGACGATCTGGACAACCTCAAGAAGATGGGGCAGGATCTGGCCCAGGTCCTGAGGCAGCTCACCAGCGACTACACGATTGGATTTGGCAAGTTCGTGGACAAAGTCAGCGTCCCTCAGACAGACATGAGGCCCGAGAAGCTGAAGGAGCCCTGGCCCAACAGTGACGCCCCCTTCTCCTTCAAAAATGTCATCAGCCTGACGGAAGACGTGGAGGAGTTCCGGAACAAGCTAAAGGGAGAGCGGATCTCAGGCAACCTGGATGCCCCCGAAGGAGGTTTCGATGCCATCCTGCAGACGGCCGTGTGCACCAGGGACATCGGCTGGCGCCCCGACAGCACCCACTTGCTGGTGTTCTCTACCGAGTCGGCCTTCCACTACGAGGCGGACGGTGCCAACGTGCTGGCTGGCATCATGAGGCGCAACGACGAGGAGTGCCACCTGGACACCACGGGCACCTACACCCAGTACAGGACACAGGACTACCCGTCGGTGCCCACCTTGGTGCGCCTGCTCGGCCAGCACAATATCATCCCCATCTTCGCAGTCACCAACTACTCCTATGGTTACTACGAGCGCATCCGCTCCAACCTGGACATCCGGGCCCTGGAAAGCCCCCGAGGCCTGCGGACAGAGGTCACCTCCAGGATGTTCCAGAAGACAAACACTGGGTCCTTTCTCATCCGGCGGGGGGAAGTGGGCACGTACCAAGTGCAGCTGCGGGCTATCGAGGACTTGGACGGGACTCACGTGTGCCAGTTGCCAGAAGTGGACCAGAAGGGCAACATCCATCTGAAGCCCTCCTTCTCCAATGGCCTCAAGATGGACGTGGACATCGTCTGTGACGTGTGCGCCTGTGAGCTGAGGAGCGGTCGTCTCGCTGCAGCTTCAACGGGGACTTCATGTGCGGACACTGTGTGTGCAATGAGGGCTGCGCCCTGCCGGCGGGAGGGTGAGGACAAGCTGTGCTCGGGGCAGGGCGAGTGCCAGTGCGGCCACTGCGTGTGCTATGGTGAAGGCCGCTATGAGGGTCAATTCTGCGAATACGACAACTTCCAGTGCCCCCGCGCCTCCGGGTTCCTCTGCAACGACCGGGGACGCTGCTCCATGGGCCAGTGTGTGTGTGAGCCTGGCTGGACAGGCTTGAGCTGTGACTGTCCTCTCAGCAATGCCACCTGCATCGACAGCAACGGGGGTATCTGTAATGGGCGTGGCTACTGCGAGTGTGGCCGCTGCCACTGCAACGAACAGTCGCTCTACACAGACACCATCTGTGAAATCAACTACTCAGCGGTGAGGCCAGATTCACTGGGTATGGGCATGGGGACCCCAGGCACAGGGGAAGATGGACAAGAGGGGCTGAGCCTGGTGCCAGAGGAGCTGCCCAAGGGTGTGACGTGGTGGGAGCAGGCCTGGCAGGGGCCGCCGCCCAACACGGTGCCCATCTGGCCCTCTTCGCCCACCCAGATCCACCTGGGCCTCTGTGAGGACCTGCGCTCCTGTGTGCAGTGCCAGGCGTGGGGCACCGGTGAAAAGAAGGGGCACATGTGTAAGGAGTGCAGCTTCAAGGTCAAGATGGTGGATGAACTTAAGAAAGCGGAGGAGGTGGTGGAGTACTGCTCCTTCCGAGACGAGGATGACGACTGTACGTACAGTTACACCGTGGAGGGGGATGGCGCCCCCGGGCCCAACAGCACCGTCCTGGTGCAGAGGAGCAAGGACTGCCCTCCCGGCACCTTCTGGTGGCTCATCCCRCTGCTCATCTTCCTCCTGTTGTTCCCGGCACTGCTGGGGCTGCTCTGCTGGAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCCCTTCTCCCGTGCTGCAACCGAGGTCACATGGTGGGCTTCAAGGAAGACCACTACATGCTGCGGGAGAACCTGATGGCCTCGGATCACCTGGACACGCCCATGCTGCGCAGCGGGAACCTCAAGGGGCGTGACATGGTCCGCTGGAAGATCACCAACAACGTGCAGCGGCCTGGCTTTGCCTCGCATGCTGCCGGCATCAACCCCACGGAGCTGGCGCCCTACGGGCTGTCCCTGCGCCTTGCCCGCCTTTGCACCGAGAACTTACTGAAGCCTGGCACCCGAGAATGTGACCAGCTGCGCCAGGAAGTGGAGGAGAACCTGAACGAGGTGTACAAGCATATCACAGGCGCACAGAAGCTCCAGCAGACCAAGTTCCGGCAGGACCACACCATTGTGGACACGGTGCTGATGGCGCCCCGCTCGGCCAAGCAGGCCCTGCTGAAGCTGACGGAGAAGCACGTGGAGCAGGGGGCCTTCCATGAGCTCAAGGTGGCCCCTGGCTACTACACCCTCACTGCAGACCAGGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGACGTGCGGGTGCCTCTCTTCATCCGGCCTGAAGACGATGACGAGAAGCAGCTGCTGGTGGAGGCCATCGACGTGCCCGTGGGCACTGCCACCCTCGGCCGCCGTCTGGTCAACATCACCATCATCAAGGAGCAAGCCAGCGGGATCGTGTCCTTTGAGCAGCCCGAGTACTTGGTCAGCCGCGGGGAGCACGTGGCCCGCATCCCCATCATCCGGCGTATCCTGGACAACGGCAAGTCCCAGGTCTCCTACTGCACGCAGGACAACACAGCGCAGGGCAACCAGGACTACATCCCCACAGAGGGCGAACTGCTATTCCAACCTGGGGAGACCTGGAAGGAGCTGCAGGTGAAGCTCCTGGAGCTGCAGGAGATGGACTCCCTCCTGCGGGGCTGCCAGACCCGCCGCTTCTACATCCAACTCAGCAACCCCAAGTTTGGGGCCCGCCTGGGCCAGCCCCAGTCTGCCACTACCCTGTCATCACCCCCACTCCCCCGGGGTGACCTGGGTGCCCCACAGAACCCCAATGCCAAGGCCGCCGGGTCCCGGAAGATCCACTTCAACTGGCTGCCCCCTCCTGGCAAGCCAACAGGGTACCGGGTGAAGTACTGGATCCAGGGTGACTCTGAGTCCGAAGCCCACCTCCTCGACAGCAAGGTGCCCTCGGTGGAGCTCACCAACCTGTACCCGTATTGCGACTACGAGATGAAGGTGTGCGCCTACGGGGCGCAGGGCGAGGGCCCCTACAGCTCCCTGGTGTCCTGTCGCACTCACCCGGAAGTACCCAGCGAGCCGGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACTGTGACCCAGCTGAGCTGGGCTGAGCCGGCCGAGACCAATGGCGAGATCACAGCCTATGAGGTCTGCTATGGCCTGGTCAACGAGGACAACCGACCCATCGGGCCCATGAAGAAGGTGCTGGTGGACAGCCCCAAGAAGCGGACGCTGCTCATTGAGAACCTGCGGGAGTCCCAGCCGTACCGCTACACGGTCAAGGCTCGCAACGGGGCAGGCTGGGGGCCTGAGCGGGAGGCCATCATCAACCTGGCCACCCAGCCCAAGCGGCCCATGTCCAGTGAGTGGTGGGTGGGAGGCACAGGGCAGACAGGGGCGGGCAGGAGGCCGAGGCTGGGGCCCCGGCTCACCCGCTCCCACCCTGCAGTCCCCATCATCCCGGACATCCCCATCGTGGACGCCCAGAGTGGGGAAGACTACGAAAGCTTCCTCATGTACAGCGATGACGTGCTCCGCTCCCCGACTGGCAGCCAGAGGCCCAGCATCTCTGATGACACTGAGCACCTGGTGAACGGGCGGATGGACTTTGCCTTCCCGGGCAGTGCCAACTCCCTGCACAGGATGACTGCGAGCAACGCCGCCTACGGCACCCACCTGAGCCCACACCTGCCCCACCGCGTGCTGAGCACGTCCTCCACCCTCTCGCGGGACTACCACTCGCTGACCCGCACGGGACACTCGCACTCGGCCACGCTGCCCAGGGACTACTCAACCCTCACCTCCCTCTCCTCCCAGAGCTCCCGCTTGGCTGCAGGTGTGCCCAACACACCCACCCGCCTGGTGTTCTCAGCCCTGGGACCCACGTCTCTGAAAGTAAGCTGGCAGGAGCCGCAGTGTGAGCGGGCGCTGCAGGGCTACAGCGTGGAGTACCAGCTGCTAAATGGCGGTGAGCTGCATCAGCTTAACATCCCCAACCCCAGCCAGACTTCGGTGGTGCTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTGGGGCCCAGAGCGCGAGGGTGTCATCACCATCGAGTCACAGGTGCACCCACAGAGCCCACTCTGCCCCCTGCCGGGCTCTGCCTTCACTCTGAGCACGCCCAGTGCCCCGGGCCCACTGGTGTTCACCGCCCTGAGCCCAGACTCTCTGCAGTTGAGCTGGGAGCGGCCGCGCAGGCCTGATGGCGACATCCTCGGCTACCTGGTGACTTGTGAGATGGCCCACGGAGGAGAGCCAGCCACCACGTTCCTGGTGGATGGCGACAGCCCCGAGAGCCGGCTGACCGTGCCAGGCCTCAGCGAGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAAGACCACCCAAGGTTTCGGGCCGGAGCGTGAGGGTATCATCACCATCGAGTCCCAGGATGGAGGCCCCTTCCCACAGCTGGGCAGCCACTCGGGGCTCTTCCAGCACCCAATGCCAGGAGAGTACAGCATCACCACCACCCACTCCAGCACCACTGAGCCCGTCCTACTGGACGGATTGACCCTGGGGTCCCAGCACTTGGAAGCCCATGGCTCCCTCACCCGGCACGTGACCCAGGAGTTTGTGAGCCGGACGCTGACCACCAGTGGAACCCTCAGCACCCACGTGGACCAACAGTTCTTTCAGACCTGA

Related Sequences

bmy_13808T0 Protein

Length: 1823 aa      View alignments
>bmy_13808T0
HKAVASQPIKRSPPRRRPPSLQPALRTLPARPRAASGAAERSPARGGRESAPRRKRMAGPHPSWWTRLLLAALLSVSFPGDMANRCKKAQVTSCTECIRVAKHCAYCTDEMFKEWRCNTQAELLAAGCRQESMVVMESSFEITEETEIDTTLHRSQVSPQGLRVRLRPGEEWHFELQVFEPLESPMDLYILMDFSNSMSDDLDNLKKMGQDLAQVLRQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWPNSDAPFSFKNVISLTEDVEEFRNKLKGERISGNLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMRRNDEECHLDTTGTYTQYRTQDYPSVPTLVRLLGQHNIIPIFAVTNYSYGYYERIRSNLDIRALESPRGLRTEVTSRMFQKTNTGSFLIRRGEVGTYQVQLRAIEDLDGTHVCQLPEVDQKGNIHLKPSFSNGLKMDVDIVCDVCACELRSGRLAAASTGTSCADTVCAMRAAPCRREGEDKLCSGQGECQCGHCVCYGEGRYEGQFCEYDNFQCPRASGFLCNDRGRCSMGQCVCEPGWTGLSCDCPLSNATCIDSNGGICNGRGYCECGRCHCNEQSLYTDTICEINYSAVRPDSLGMGMGTPGTGEDGQEGLSLVPEELPKGVTWWEQAWQGPPPNTVPIWPSSPTQIHLGLCEDLRSCVQCQAWGTGEKKGHMCKECSFKVKMVDELKKAEEVVEYCSFRDEDDDCTYSYTVEGDGAPGPNSTVLVQRSKDCPPGTFWWLIPLLIFLLLFPALLGLLCWKYCACCKACLALLPCCNRGHMVGFKEDHYMLRENLMASDHLDTPMLRSGNLKGRDMVRWKITNNVQRPGFASHAAGINPTELAPYGLSLRLARLCTENLLKPGTRECDQLRQEVEENLNEVYKHITGAQKLQQTKFRQDHTIVDTVLMAPRSAKQALLKLTEKHVEQGAFHELKVAPGYYTLTADQDARGMVEFQEGVELVDVRVPLFIRPEDDDEKQLLVEAIDVPVGTATLGRRLVNITIIKEQASGIVSFEQPEYLVSRGEHVARIPIIRRILDNGKSQVSYCTQDNTAQGNQDYIPTEGELLFQPGETWKELQVKLLELQEMDSLLRGCQTRRFYIQLSNPKFGARLGQPQSATTLSSPPLPRGDLGAPQNPNAKAAGSRKIHFNWLPPPGKPTGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHPEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNEDNRPIGPMKKVLVDSPKKRTLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSSEWWVGGTGQTGAGRRPRLGPRLTRSHPAVPIIPDIPIVDAQSGEDYESFLMYSDDVLRSPTGSQRPSISDDTEHLVNGRMDFAFPGSANSLHRMTASNAAYGTHLSPHLPHRVLSTSSTLSRDYHSLTRTGHSHSATLPRDYSTLTSLSSQSSRLAAGVPNTPTRLVFSALGPTSLKVSWQEPQCERALQGYSVEYQLLNGGELHQLNIPNPSQTSVVLEDLLPNHSYVFRVRAQSQEGWGPEREGVITIESQVHPQSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPDGDILGYLVTCEMAHGGEPATTFLVDGDSPESRLTVPGLSENVPYKFKVQAKTTQGFGPEREGIITIESQDGGPFPQLGSHSGLFQHPMPGEYSITTTHSSTTEPVLLDGLTLGSQHLEAHGSLTRHVTQEFVSRTLTTSGTLSTHVDQQFFQT*