Sequence detailsbmy_13808 (Coding sequence)

Part of scaffold_919 (SequenceType object (1))

For more information consult the page for scaffold_919 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGB4ENSTTRG00000015887 (Bottlenosed dolphin)

Gene Details

integrin, beta 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015053, Bottlenosed dolphin)

Protein Percentage 93.03%
cDNA percentage 94.26%
Ka/Ks Ratio 0.19106 (Ka = 0.0231, Ks = 0.121)

ITGB4ENSBTAG00000018169 (Cow)

Gene Details

Integrin beta

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040201, Cow)

Protein Percentage 91.73%
cDNA percentage 90.69%
Ka/Ks Ratio 0.08021 (Ka = 0.0411, Ks = 0.5127)

ITGB4 (Minke Whale)

Gene Details

integrin, beta 4

External Links

Gene match (Identifier: BACU011521, Minke Whale)

Protein Percentage 97.44%
cDNA percentage 97.97%
Ka/Ks Ratio 0.18426 (Ka = 0.0123, Ks = 0.0668)

Additional orthologs identified in other species via the OPTIC pipeline.

ITGB4 (Human)   Itgb4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5469 bp    Location:716438..686301   Strand:-
Raw sequence 
>bmy_13808
CATAAAGCGGTCGCCTCCCAGCCCATAAAGCGGTCCCCTCCCCGCCGCCGCCCGCCCTCCCTGCAGCCCGCCCTCCGGACACTCCCGGCTCGCCCGCGCGCCGCATCCGGAGCCGCCGAGCGGAGCCCAGCGCGGGGAGGGCGCGAGTCAGCCCCAAGGAGGAAGAGGATGGCAGGGCCGCACCCCAGCTGGTGGACCAGGCTGCTGCTGGCAGCCCTGCTGAGCGTCAGCTTCCCCGGGGACATGGCGAACCGCTGCAAGAAGGCCCAGGTGACGAGCTGCACCGAGTGCATCCGCGTGGCCAAGCACTGCGCCTACTGCACGGACGAGATGTTCAAGGAATGGCGCTGCAACACCCAGGCAGAGCTGCTGGCTGCGGGCTGCCGGCAGGAGAGCATGGTGGTCATGGAGAGCAGCTTCGAGATCACAGAGGAAACGGAGATCGACACCACCCTGCACCGCAGCCAGGTGTCCCCCCAGGGGCTGCGGGTGCGGCTGCGGCCGGGAGAGGAGTGGCACTTTGAGCTGCAGGTGTTTGAGCCCCTGGAGAGCCCCATGGACCTGTATATCCTCATGGACTTCTCCAACTCCATGTCTGACGATCTGGACAACCTCAAGAAGATGGGGCAGGATCTGGCCCAGGTCCTGAGGCAGCTCACCAGCGACTACACGATTGGATTTGGCAAGTTCGTGGACAAAGTCAGCGTCCCTCAGACAGACATGAGGCCCGAGAAGCTGAAGGAGCCCTGGCCCAACAGTGACGCCCCCTTCTCCTTCAAAAATGTCATCAGCCTGACGGAAGACGTGGAGGAGTTCCGGAACAAGCTAAAGGGAGAGCGGATCTCAGGCAACCTGGATGCCCCCGAAGGAGGTTTCGATGCCATCCTGCAGACGGCCGTGTGCACCAGGGACATCGGCTGGCGCCCCGACAGCACCCACTTGCTGGTGTTCTCTACCGAGTCGGCCTTCCACTACGAGGCGGACGGTGCCAACGTGCTGGCTGGCATCATGAGGCGCAACGACGAGGAGTGCCACCTGGACACCACGGGCACCTACACCCAGTACAGGACACAGGACTACCCGTCGGTGCCCACCTTGGTGCGCCTGCTCGGCCAGCACAATATCATCCCCATCTTCGCAGTCACCAACTACTCCTATGGTTACTACGAGCGCATCCGCTCCAACCTGGACATCCGGGCCCTGGAAAGCCCCCGAGGCCTGCGGACAGAGGTCACCTCCAGGATGTTCCAGAAGACAAACACTGGGTCCTTTCTCATCCGGCGGGGGGAAGTGGGCACGTACCAAGTGCAGCTGCGGGCTATCGAGGACTTGGACGGGACTCACGTGTGCCAGTTGCCAGAAGTGGACCAGAAGGGCAACATCCATCTGAAGCCCTCCTTCTCCAATGGCCTCAAGATGGACGTGGACATCGTCTGTGACGTGTGCGCCTGTGAGCTGAGGAGCGGTCGTCTCGCTGCAGCTTCAACGGGGACTTCATGTGCGGACACTGTGTGTGCAATGAGGGCTGCGCCCTGCCGGCGGGAGGGTGAGGACAAGCTGTGCTCGGGGCAGGGCGAGTGCCAGTGCGGCCACTGCGTGTGCTATGGTGAAGGCCGCTATGAGGGTCAATTCTGCGAATACGACAACTTCCAGTGCCCCCGCGCCTCCGGGTTCCTCTGCAACGACCGGGGACGCTGCTCCATGGGCCAGTGTGTGTGTGAGCCTGGCTGGACAGGCTTGAGCTGTGACTGTCCTCTCAGCAATGCCACCTGCATCGACAGCAACGGGGGTATCTGTAATGGGCGTGGCTACTGCGAGTGTGGCCGCTGCCACTGCAACGAACAGTCGCTCTACACAGACACCATCTGTGAAATCAACTACTCAGCGGTGAGGCCAGATTCACTGGGTATGGGCATGGGGACCCCAGGCACAGGGGAAGATGGACAAGAGGGGCTGAGCCTGGTGCCAGAGGAGCTGCCCAAGGGTGTGACGTGGTGGGAGCAGGCCTGGCAGGGGCCGCCGCCCAACACGGTGCCCATCTGGCCCTCTTCGCCCACCCAGATCCACCTGGGCCTCTGTGAGGACCTGCGCTCCTGTGTGCAGTGCCAGGCGTGGGGCACCGGTGAAAAGAAGGGGCACATGTGTAAGGAGTGCAGCTTCAAGGTCAAGATGGTGGATGAACTTAAGAAAGCGGAGGAGGTGGTGGAGTACTGCTCCTTCCGAGACGAGGATGACGACTGTACGTACAGTTACACCGTGGAGGGGGATGGCGCCCCCGGGCCCAACAGCACCGTCCTGGTGCAGAGGAGCAAGGACTGCCCTCCCGGCACCTTCTGGTGGCTCATCCCRCTGCTCATCTTCCTCCTGTTGTTCCCGGCACTGCTGGGGCTGCTCTGCTGGAAGTACTGTGCCTGCTGCAAGGCCTGCCTGGCCCTTCTCCCGTGCTGCAACCGAGGTCACATGGTGGGCTTCAAGGAAGACCACTACATGCTGCGGGAGAACCTGATGGCCTCGGATCACCTGGACACGCCCATGCTGCGCAGCGGGAACCTCAAGGGGCGTGACATGGTCCGCTGGAAGATCACCAACAACGTGCAGCGGCCTGGCTTTGCCTCGCATGCTGCCGGCATCAACCCCACGGAGCTGGCGCCCTACGGGCTGTCCCTGCGCCTTGCCCGCCTTTGCACCGAGAACTTACTGAAGCCTGGCACCCGAGAATGTGACCAGCTGCGCCAGGAAGTGGAGGAGAACCTGAACGAGGTGTACAAGCATATCACAGGCGCACAGAAGCTCCAGCAGACCAAGTTCCGGCAGGACCACACCATTGTGGACACGGTGCTGATGGCGCCCCGCTCGGCCAAGCAGGCCCTGCTGAAGCTGACGGAGAAGCACGTGGAGCAGGGGGCCTTCCATGAGCTCAAGGTGGCCCCTGGCTACTACACCCTCACTGCAGACCAGGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGACGTGCGGGTGCCTCTCTTCATCCGGCCTGAAGACGATGACGAGAAGCAGCTGCTGGTGGAGGCCATCGACGTGCCCGTGGGCACTGCCACCCTCGGCCGCCGTCTGGTCAACATCACCATCATCAAGGAGCAAGCCAGCGGGATCGTGTCCTTTGAGCAGCCCGAGTACTTGGTCAGCCGCGGGGAGCACGTGGCCCGCATCCCCATCATCCGGCGTATCCTGGACAACGGCAAGTCCCAGGTCTCCTACTGCACGCAGGACAACACAGCGCAGGGCAACCAGGACTACATCCCCACAGAGGGCGAACTGCTATTCCAACCTGGGGAGACCTGGAAGGAGCTGCAGGTGAAGCTCCTGGAGCTGCAGGAGATGGACTCCCTCCTGCGGGGCTGCCAGACCCGCCGCTTCTACATCCAACTCAGCAACCCCAAGTTTGGGGCCCGCCTGGGCCAGCCCCAGTCTGCCACTACCCTGTCATCACCCCCACTCCCCCGGGGTGACCTGGGTGCCCCACAGAACCCCAATGCCAAGGCCGCCGGGTCCCGGAAGATCCACTTCAACTGGCTGCCCCCTCCTGGCAAGCCAACAGGGTACCGGGTGAAGTACTGGATCCAGGGTGACTCTGAGTCCGAAGCCCACCTCCTCGACAGCAAGGTGCCCTCGGTGGAGCTCACCAACCTGTACCCGTATTGCGACTACGAGATGAAGGTGTGCGCCTACGGGGCGCAGGGCGAGGGCCCCTACAGCTCCCTGGTGTCCTGTCGCACTCACCCGGAAGTACCCAGCGAGCCGGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACTGTGACCCAGCTGAGCTGGGCTGAGCCGGCCGAGACCAATGGCGAGATCACAGCCTATGAGGTCTGCTATGGCCTGGTCAACGAGGACAACCGACCCATCGGGCCCATGAAGAAGGTGCTGGTGGACAGCCCCAAGAAGCGGACGCTGCTCATTGAGAACCTGCGGGAGTCCCAGCCGTACCGCTACACGGTCAAGGCTCGCAACGGGGCAGGCTGGGGGCCTGAGCGGGAGGCCATCATCAACCTGGCCACCCAGCCCAAGCGGCCCATGTCCAGTGAGTGGTGGGTGGGAGGCACAGGGCAGACAGGGGCGGGCAGGAGGCCGAGGCTGGGGCCCCGGCTCACCCGCTCCCACCCTGCAGTCCCCATCATCCCGGACATCCCCATCGTGGACGCCCAGAGTGGGGAAGACTACGAAAGCTTCCTCATGTACAGCGATGACGTGCTCCGCTCCCCGACTGGCAGCCAGAGGCCCAGCATCTCTGATGACACTGAGCACCTGGTGAACGGGCGGATGGACTTTGCCTTCCCGGGCAGTGCCAACTCCCTGCACAGGATGACTGCGAGCAACGCCGCCTACGGCACCCACCTGAGCCCACACCTGCCCCACCGCGTGCTGAGCACGTCCTCCACCCTCTCGCGGGACTACCACTCGCTGACCCGCACGGGACACTCGCACTCGGCCACGCTGCCCAGGGACTACTCAACCCTCACCTCCCTCTCCTCCCAGAGCTCCCGCTTGGCTGCAGGTGTGCCCAACACACCCACCCGCCTGGTGTTCTCAGCCCTGGGACCCACGTCTCTGAAAGTAAGCTGGCAGGAGCCGCAGTGTGAGCGGGCGCTGCAGGGCTACAGCGTGGAGTACCAGCTGCTAAATGGCGGTGAGCTGCATCAGCTTAACATCCCCAACCCCAGCCAGACTTCGGTGGTGCTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTGGGGCCCAGAGCGCGAGGGTGTCATCACCATCGAGTCACAGGTGCACCCACAGAGCCCACTCTGCCCCCTGCCGGGCTCTGCCTTCACTCTGAGCACGCCCAGTGCCCCGGGCCCACTGGTGTTCACCGCCCTGAGCCCAGACTCTCTGCAGTTGAGCTGGGAGCGGCCGCGCAGGCCTGATGGCGACATCCTCGGCTACCTGGTGACTTGTGAGATGGCCCACGGAGGAGAGCCAGCCACCACGTTCCTGGTGGATGGCGACAGCCCCGAGAGCCGGCTGACCGTGCCAGGCCTCAGCGAGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAAGACCACCCAAGGTTTCGGGCCGGAGCGTGAGGGTATCATCACCATCGAGTCCCAGGATGGAGGCCCCTTCCCACAGCTGGGCAGCCACTCGGGGCTCTTCCAGCACCCAATGCCAGGAGAGTACAGCATCACCACCACCCACTCCAGCACCACTGAGCCCGTCCTACTGGACGGATTGACCCTGGGGTCCCAGCACTTGGAAGCCCATGGCTCCCTCACCCGGCACGTGACCCAGGAGTTTGTGAGCCGGACGCTGACCACCAGTGGAACCCTCAGCACCCACGTGGACCAACAGTTCTTTCAGACCTGA

Related Sequences

bmy_13808T0 SequenceType object (3)

Length: 1823 aa      View alignments
>bmy_13808T0
HKAVASQPIKRSPPRRRPPSLQPALRTLPARPRAASGAAERSPARGGRESAPRRKRMAGPHPSWWTRLLLAALLSVSFPGDMANRCKKAQVTSCTECIRVAKHCAYCTDEMFKEWRCNTQAELLAAGCRQESMVVMESSFEITEETEIDTTLHRSQVSPQGLRVRLRPGEEWHFELQVFEPLESPMDLYILMDFSNSMSDDLDNLKKMGQDLAQVLRQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWPNSDAPFSFKNVISLTEDVEEFRNKLKGERISGNLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMRRNDEECHLDTTGTYTQYRTQDYPSVPTLVRLLGQHNIIPIFAVTNYSYGYYERIRSNLDIRALESPRGLRTEVTSRMFQKTNTGSFLIRRGEVGTYQVQLRAIEDLDGTHVCQLPEVDQKGNIHLKPSFSNGLKMDVDIVCDVCACELRSGRLAAASTGTSCADTVCAMRAAPCRREGEDKLCSGQGECQCGHCVCYGEGRYEGQFCEYDNFQCPRASGFLCNDRGRCSMGQCVCEPGWTGLSCDCPLSNATCIDSNGGICNGRGYCECGRCHCNEQSLYTDTICEINYSAVRPDSLGMGMGTPGTGEDGQEGLSLVPEELPKGVTWWEQAWQGPPPNTVPIWPSSPTQIHLGLCEDLRSCVQCQAWGTGEKKGHMCKECSFKVKMVDELKKAEEVVEYCSFRDEDDDCTYSYTVEGDGAPGPNSTVLVQRSKDCPPGTFWWLIPLLIFLLLFPALLGLLCWKYCACCKACLALLPCCNRGHMVGFKEDHYMLRENLMASDHLDTPMLRSGNLKGRDMVRWKITNNVQRPGFASHAAGINPTELAPYGLSLRLARLCTENLLKPGTRECDQLRQEVEENLNEVYKHITGAQKLQQTKFRQDHTIVDTVLMAPRSAKQALLKLTEKHVEQGAFHELKVAPGYYTLTADQDARGMVEFQEGVELVDVRVPLFIRPEDDDEKQLLVEAIDVPVGTATLGRRLVNITIIKEQASGIVSFEQPEYLVSRGEHVARIPIIRRILDNGKSQVSYCTQDNTAQGNQDYIPTEGELLFQPGETWKELQVKLLELQEMDSLLRGCQTRRFYIQLSNPKFGARLGQPQSATTLSSPPLPRGDLGAPQNPNAKAAGSRKIHFNWLPPPGKPTGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHPEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNEDNRPIGPMKKVLVDSPKKRTLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSSEWWVGGTGQTGAGRRPRLGPRLTRSHPAVPIIPDIPIVDAQSGEDYESFLMYSDDVLRSPTGSQRPSISDDTEHLVNGRMDFAFPGSANSLHRMTASNAAYGTHLSPHLPHRVLSTSSTLSRDYHSLTRTGHSHSATLPRDYSTLTSLSSQSSRLAAGVPNTPTRLVFSALGPTSLKVSWQEPQCERALQGYSVEYQLLNGGELHQLNIPNPSQTSVVLEDLLPNHSYVFRVRAQSQEGWGPEREGVITIESQVHPQSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPDGDILGYLVTCEMAHGGEPATTFLVDGDSPESRLTVPGLSENVPYKFKVQAKTTQGFGPEREGIITIESQDGGPFPQLGSHSGLFQHPMPGEYSITTTHSSTTEPVLLDGLTLGSQHLEAHGSLTRHVTQEFVSRTLTTSGTLSTHVDQQFFQT*