Sequence detailsbmy_13824 (Coding sequence)

Part of scaffold_908 (SequenceType object (1))

For more information consult the page for scaffold_908 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGA10ENSTTRG00000009158 (Bottlenosed dolphin)

Gene Details

integrin, alpha 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008690, Bottlenosed dolphin)

Protein Percentage 94.32%
cDNA percentage 94.89%
Ka/Ks Ratio 0.38631 (Ka = 0.0119, Ks = 0.0309)

ITGA10ENSBTAG00000008373 (Cow)

Gene Details

integrin alpha-10 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011023, Cow)

Protein Percentage 93.79%
cDNA percentage 93.88%
Ka/Ks Ratio 0.22326 (Ka = 0.0322, Ks = 0.144)

Additional orthologs identified in other species via the OPTIC pipeline.

ITGA10 (Human)   Itga10 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3435 bp    Location:650537..634539   Strand:-
Raw sequence 
>bmy_13824
GCCAGTGGGAGGGGGCAGGATGGGAGGGAAAGTACAGAAAACAGAGAAGGAGAGGGACAGAGGCACAGAGGACTTCTCACGCAGACAGAACATCCAGACATGGAGTTCCCCCTCATCCCCCACCTGTTCTTGCCCCTGATGTTCCTGACAGGTCTCTGCTCTCCCTTTAACCTGGACGTGCATCACCCACGCCTATTTCCAGGGCCACCAGAGGCTGAATTTGGATACAGTGTCTTACAACATGTTGGGGGTGGACGCCAATGGATTTTGGTGGGTGCCCCCTGGGATGGGCCTTCAGGTGACCGAAGGGGAGATGTTTATCGCTGCCCTGTAGGGGGCTCCCACAATGCCCCATGTGCCAAGGGCCACTTGGGTGACTATCCACTGGGAAATTCATCTCATCCTGCTGTGAATATGCACCTGGGGATGTCTCTACTGGAGACAGTTGGTGATGGGGGATTCCTGGTTTGTGCCCCTCTCTGGTCTCGTGCTTGTGGCTCATCTGTCTTCAGTTCTGGGATATGTGCCCGTGTAGATGCTTCGTTCCAGCCCCAGGGAAGCCTGGCACCCACTGTACAACGCTGCCCCACATACATGGATGTCGTCATTGTGTTGGATGGCTCCAACAGCATCTACCCCTGGTCTGAAGTTCAGACCTTCCTGCGAAGACTAGTAAGGAGATTATTTATTGACCCGGAGCAGATACAGGTGGGACTGGTACAGTATGGGGAGAGCTCTGTACATGAGTGGTCCCTGGGAGATTTCCGAACCAAAGAAGAAGTGGTGAGAGCAGCAAGGAACCTGAGCCGGCGGGAGGGACGAGAAACAAAGACTGCTCAAGCAATACTGATGGCCTGCACAGAAGGATTCAGTCAGTCCCATGGGGGCCGACCAGAGGCTGCCAGGCTACTGGTGGTTGTCACTGATGGAGAGTCACATGATGGAGAGGAACTWCCTACAGCACTAAAAGCCTGTGAAGCTGGAAGAGTGACACGCTATGGGATTGCGGTCCTTGGTCACTACCTCCGGCGGCAGCGAGACCCCAGCTCTTTCCTGCAGGAAATCAGAGCTATTGCCAGTGATCCAGACGAGAGATTCTTCTTCAATGTCACAGATGAAGCAGCACTGACTGACATTGTGGATGCATTAGGGGACCGGATTTTTGGCCTTGAGGGGTCCCACGGAGAAAATGAAAGCTCCTTTGGGCTGGAAATGTCTCAGATTGGTTTCTCTACTCATCGGCTAAAGGATGGGATTCTCTTTGGGATGGTAGGGGCTTATGACTGGGGGGGCTCAGTGTTATGGCTTGAAGAAGGTCGCCGCCTCTTCCCGCCACGGACGGCCCTGGAAGATGAGTTCCCCCCTGCATTGCAGAACCATGCAGCCTACCTGGGTTACTCTGTTTCCTCCATGCTTTTGCGGGGTGGACGCCGCCTCTTTCTCTCAGGAGCTCCTCGGTTTAGACATCGAGGAAAGGTCATCGCCTTCCAGCTTAAGAAAGATGGGGCTGTGAGGGTCGCCCAGAGCCTCCAGGGGGAGCAGATTGGCTCGTACTTTGGCAGTGAGCTCTGCCCATTGGATACGGATGGGGATGGAACAACTGATGTCTTGCTTGTGGCTGCCCCCATGTTCCTGGGGCCCCAGAACAAGGAGACAGGACGTGTTTATGTGTATCTGGTGGGCCAGCAGTCCTTGCTGACACTCCAGGGAACGCTTCAGCCAGAACCCCCGCAGGATGCTCGGTTTGGCTTTGCCATGGCTGCCCTTCCTGATCTGAACCAAGATGGTTTTGCTGATGTGGCTATGGGAGCGCCCCTGGAGGATGGGCACCGTGGAGCACTGTACCTCTATCACGGGACCCAGAGTGGAGTCAAGCCCCGTCCTGCCCAGCGGATTGCTGCTGTCTCCATGCCACAGGCCCTCAGCTACTTTGGCCGAAGTGTGGATGGCCGCTCCCGGCCCATTGTCCACCTGGCCCCTTCACTGGATGTGACCCCGCCGGCCATCAGTGTGGTTCAGAGGGACTGCAAGCGACGCAGCCAGGAGGCAGCCTGCCTGTCCGCAGCCCTTTGCTTCCAAGTGACCTCCCGCACTCCCGGCCGCTGGGATCGCCAATTCCATGTGCGGTTCATAGCATCGCTGGATGAGTGGACAGCTGGGGCCCGTGCAGCGTTTGACGGCTCTGGCCAGAGGCTGCCCCCTCGGCGGCTCCGGCTCAGTGTGGGGACTATCACTTGTGAGCCGCTGCACTTCCATGTGCTGGATACATCAGATTACCTCCGGCCAGTGGCCTTGACTGTGACCTTTGCTTTGGACAACACCACAAAGCCAGGGCCTGTGCTGGATGAGGGCTCACCCACCTCCATACGAAAGCTGGTCCCCTTCTCGAAGGACTGTGGCCCTGACAATGAATGTGTCACAGATCTGGTACTTCGAGCTAATATGGACATCAGAGGCTCCAGGAAGGACCCATTCGTGGCTCGAGGTGGTCGGCGGAAAGTGCTGGTGTCAGCAACTCTGGAGAACAGGAAGGAAAATGCCTACAACACTAGCCTGAGTCTCAGCTTCTCCAGAAACCTTCACCTGTCCAGTTTTACTCCTCAGGGGGACGGCCCAGCGAAGGTGGAGTGTGCAGCCCCTTCCCCTCATGCCCGCCTCTGCAGCGTGGGGCATCCTGTCTTCCAGGCTGGAGCCAAGGTGACCTTTCTGCTAGAGTTTGAGTTTAGCTGCTCCTTCCTCCTGAGCCAGGTCCTTGTGAGGCTGACTGCCACCAGCTATAGCCTGGAGAGAAATGGCACGCTTCATGATAACACAGCCCAGACCTCAGCCTACATCCAGTATGAGCCTCACCTCCTATTCTCTAGTGAGTCCACTCTGCACCGCTATGAGGTTCACCCATATGGGACCCTCCCAGTGGGCCCTGGCCCTGAATTCAAAACCACTCTTAGGGTTCAGAACCTTGGCTGCTATGTGCTCAGTGGCCTCATCATCTCAGCCCTCCTTCCAGCTGTGGCCCATGGGGGCAATTACTTCCTGTCACTGTCTCAAGTCATCACTAACAATGCAAGCTGCACAGTGCAGAACCTGACTGAGCCCCCAGAGCCCCCTGTGCATCCAGAGGAGCTTCAGCACACAAGCTGGCTGAATGGGAGCAATTCCCGGTGTCAGGTCCTGAGGTGCCACCTTGGGCGACTGGCAAAGGGGACTGAGGTCTCTGTTGGACTACTGAGGCTGGTTCACAATGAATTTTTCCGAAGGAGCCTCCTGGAGGTGATTCAGTCCCGCCCTGTCCTCATCTCCCTGTGGATCCTCATTGGCAGTGTCCTGGGAGGGCTGCTTCTGCTTGCTCTCCTTGTCTTCTGCCTTTGGAAGCTTGGCTTCTTTGCCCGTAAGAAAATCCCCGAGGAAGAAAAAAGAGAAGAGAAATTGGAGTAA

Related Sequences

bmy_13824T0 SequenceType object (3)

Length: 1145 aa      View alignments
>bmy_13824T0
ASGRGQDGRESTENREGEGQRHRGLLTQTEHPDMEFPLIPHLFLPLMFLTGLCSPFNLDVHHPRLFPGPPEAEFGYSVLQHVGGGRQWILVGAPWDGPSGDRRGDVYRCPVGGSHNAPCAKGHLGDYPLGNSSHPAVNMHLGMSLLETVGDGGFLVCAPLWSRACGSSVFSSGICARVDASFQPQGSLAPTVQRCPTYMDVVIVLDGSNSIYPWSEVQTFLRRLVRRLFIDPEQIQVGLVQYGESSVHEWSLGDFRTKEEVVRAARNLSRREGRETKTAQAILMACTEGFSQSHGGRPEAARLLVVVTDGESHDGEELPTALKACEAGRVTRYGIAVLGHYLRRQRDPSSFLQEIRAIASDPDERFFFNVTDEAALTDIVDALGDRIFGLEGSHGENESSFGLEMSQIGFSTHRLKDGILFGMVGAYDWGGSVLWLEEGRRLFPPRTALEDEFPPALQNHAAYLGYSVSSMLLRGGRRLFLSGAPRFRHRGKVIAFQLKKDGAVRVAQSLQGEQIGSYFGSELCPLDTDGDGTTDVLLVAAPMFLGPQNKETGRVYVYLVGQQSLLTLQGTLQPEPPQDARFGFAMAALPDLNQDGFADVAMGAPLEDGHRGALYLYHGTQSGVKPRPAQRIAAVSMPQALSYFGRSVDGRSRPIVHLAPSLDVTPPAISVVQRDCKRRSQEAACLSAALCFQVTSRTPGRWDRQFHVRFIASLDEWTAGARAAFDGSGQRLPPRRLRLSVGTITCEPLHFHVLDTSDYLRPVALTVTFALDNTTKPGPVLDEGSPTSIRKLVPFSKDCGPDNECVTDLVLRANMDIRGSRKDPFVARGGRRKVLVSATLENRKENAYNTSLSLSFSRNLHLSSFTPQGDGPAKVECAAPSPHARLCSVGHPVFQAGAKVTFLLEFEFSCSFLLSQVLVRLTATSYSLERNGTLHDNTAQTSAYIQYEPHLLFSSESTLHRYEVHPYGTLPVGPGPEFKTTLRVQNLGCYVLSGLIISALLPAVAHGGNYFLSLSQVITNNASCTVQNLTEPPEPPVHPEELQHTSWLNGSNSRCQVLRCHLGRLAKGTEVSVGLLRLVHNEFFRRSLLEVIQSRPVLISLWILIGSVLGGLLLLALLVFCLWKLGFFARKKIPEEEKREEKLE*