Sequence detailsbmy_13874 (Coding sequence)

Part of scaffold_923 (SequenceType object (1))

For more information consult the page for scaffold_923 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPRNENSTTRG00000015355 (Bottlenosed dolphin)

Gene Details

taperin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014552, Bottlenosed dolphin)

Protein Percentage 94.42%
cDNA percentage 95.35%
Ka/Ks Ratio 0.27111 (Ka = 0.031, Ks = 0.1144)

TPRNENSBTAG00000047715 (Cow)

Gene Details

uncharacterized protein LOC100125320

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000054003, Cow)

Protein Percentage 82.91%
cDNA percentage 86.85%
Ka/Ks Ratio 0.23522 (Ka = 0.0913, Ks = 0.388)

Additional orthologs identified in other species via the OPTIC pipeline.

TPRN (Human)   Tprn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1365 bp    Location:59407..51909   Strand:-
Raw sequence 
>bmy_13874
ACCCCCAGTGCCACTCCAGTCGCGCCCCCGGCATTGCCCACGCTCAGCCCTGCCAGTGCCACTCCCAGCCAGCGCCAGTGGGTCTCCGCGGCCACCAGCGCCAACGACTCCTTCGAGATACTGCCGGCCTCCAAGCCAGACATGGACACGATCCCTGCCGGGGACCTCCAGGCCCGGGCTCTGGCCAGCCTTCGCATGAACTCTCGAAACTCTTTCGTGTTCATCCCCAAGCGCAAGACTTCCGGGGCCCCTCCTGCGGAAGGGAGTCAGTCCGTGGGGCCTCCAGAGGGAGAAGTTGGCTGGGCCTCCCAGCACCAGGAGCGTGAAGCCCAGCAGGTGCCTGGAGCAGATGGTGTATTTGCCGGTGGGAGGAGCCCCTCGGGGGTCGAGGAGGGAGGCTGCCCCATGCCAGCCACTGCCCTCGTGGACTGGACCGTTCGGTGGCAGAGGCTGTCCTCACCACCCCCGTCCCCACTGGTCGCCACTGAAGCTGAGCCTGCCCAGGGCTTTGGGGTTCCTGGCTTGACCAAGAATGGCAGGGAGCCTGGGAGGCCAGGGCTGCCCGTCACCTTCATTGATGAGGTGGACTCGGAGGACGAGGTTCCCCAAGAAGCCAAACTGCCCTGCCCCGGGGCAGCTGCGCCTCCCCAGTACCACCCGCATCCCACCGGGCCTGGGCACCTGTCAGAGCTCCAGCACCGAGGTGGCAACACCTTCACGGTGGTGCCCAAGAGGAAGCCAGGGGCCCTGCAGGCCAACGGGGAGGCCAGGCCGAGGGAGGCTGAGGAAGAGGGGCCGGGCAGCCTTTCGGAGCCCCCTGCTGCCTTGGGGCCCTCAGTGAAGAAGCGCTACCCCGCTGTGCATGAGATTGAGGTGATTGGCGGCTACCTGGCCCTGCAGAAGTCCTGCCTCACCAAGGCCGGCTCTTCAAGGAAGAAGATGAAGATCTCCTTCAATGACAAGAGTCTGCAGACTACGTTTGAGTACCCCCCCGAGAGCTCCCTGCAGGAGGAAGAGGCAGAGGCCGAGAAGGGGAGAGAGGAAGAGGAGAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGGTCCGGCTCAGACACGGCGGCGGAGAAGCCCTTTGTGCTCTTCCTGCCCCGAGCCACGTTCGTGAACAGCGTGGGCCCCGAGAGCCCTCGGCTGCCGGATGGCAGCTCCGGCCTGTCCAGCTACACTCCGAAGCACTCCGTGGCCTTCAGCAAGTGGCAGGAGCGGGCGCTGGAGCACGCTCCGAGCACGGAGGAGCCCCCGTCCAAGGAGGTCATGCTCACCCCTGCCGGTCAGAATGACCTCGCGGACTTCCGAAGCGAGCCAGCCCTCTACTTCTGA

Related Sequences

bmy_13874T0 SequenceType object (3)

Length: 455 aa      View alignments
>bmy_13874T0
TPSATPVAPPALPTLSPASATPSQRQWVSAATSANDSFEILPASKPDMDTIPAGDLQARALASLRMNSRNSFVFIPKRKTSGAPPAEGSQSVGPPEGEVGWASQHQEREAQQVPGADGVFAGGRSPSGVEEGGCPMPATALVDWTVRWQRLSSPPPSPLVATEAEPAQGFGVPGLTKNGREPGRPGLPVTFIDEVDSEDEVPQEAKLPCPGAAAPPQYHPHPTGPGHLSELQHRGGNTFTVVPKRKPGALQANGEARPREAEEEGPGSLSEPPAALGPSVKKRYPAVHEIEVIGGYLALQKSCLTKAGSSRKKMKISFNDKSLQTTFEYPPESSLQEEEAEAEKGREEEEKEEEEEEEEEEGSGSDTAAEKPFVLFLPRATFVNSVGPESPRLPDGSSGLSSYTPKHSVAFSKWQERALEHAPSTEEPPSKEVMLTPAGQNDLADFRSEPALYF*