Sequence detailsbmy_13890 (Coding sequence)

Part of scaffold_923 (SequenceType object (1))

For more information consult the page for scaffold_923 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NSMFENSTTRG00000010736 (Bottlenosed dolphin)

Gene Details

NMDA receptor synaptonuclear signaling and neuronal migration factor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010196, Bottlenosed dolphin)

Protein Percentage 95.07%
cDNA percentage 94.94%
Ka/Ks Ratio 0.1155 (Ka = 0.0095, Ks = 0.0819)

NELFENSBTAG00000030247 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016087, Cow)

Protein Percentage 96.37%
cDNA percentage 94.09%
Ka/Ks Ratio 0.0424 (Ka = 0.015, Ks = 0.3549)

Additional orthologs identified in other species via the OPTIC pipeline.

NSMF (Human)   Nsmf (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1956 bp    Location:271231..262441   Strand:-
Raw sequence 
>bmy_13890
ATGGGCGCCGTCGCCTCCCGGAGGAGGGCGCTGCGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCGAGCGTTTGGCGAGTACCTGTCCCAGAGTCACCCCGAGAACCGAAACGGTGCAGACCACCTGCTGGCTGACGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCTGCCCCCCAGAACAAGCGCCGCCTCTCCCTCATCTCCAACGGCCGCTATGAGGGCAGCCTCCCGGAGGAGGCCGTCAGTGGGAAGCCGGCCGGCGAGGGCCCCCAGCCCCGTGTGTATACCATCTCCGGGGAGCCGGCCCTGCTGCCCGGCCCGGAGGCCGAGGCCATCGAGCTGGCTGTGGTGAAGGGGCGGCACCCCCGCCACCATAGCCAGCCCCTGCGCGCCAGCCCGGCCGGCAGCCGTGAGGACGTCAGCAGACCCTGCCACAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAATGTCCCGGATGTGCCCAGCTCGCCCCCAGTCCTTCCCCTCAGGCCTTTGGGCTGGACCAACCGCCCCTGCCTGAGGCCGCCAGCCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGCGTGTCTGATGACATCCCCATCCGTACCTGGTTCCCCAAGGAAAACCTCTTCAGTTTCCAGACAGCAACCACAACTATGCAAGCGTTGGGGCAGGCCAGGGACCTGGGCCTTGACCATGAGGGCGTGCTGGGTCCCAGCGAGCGCCAAGGCTACAGCAGGGCCTGTGGGAACTGGGCCGAGGACAGGGCGAGGCAGGCCGGGACCTTCTGCCTGGCCCAGCGCCCTGGATGCCCCGCTGGGCCCTGTGCTCGAGCCTCTGTCCCCACGTCTCTGTCCCTCTTGCCTGCGGCCAAGGGCAGTGCTGACTCGTGGTGGTTTCCCAGGGTATTCAGGGGCTACGCGGAGAGGAAGCGCCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGCGGGTGAAGGCCCAGACCCCTGCCCCGGTCCACCTCGTGCGGCTGCAGGCCCCGCCCCTGACGGGTTCTGCTTTCGCTGCAGCGTTCGCCGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCGACACCTCCCACGACTCCCGAGACAGTAGTGACCTGCAGAGCTCACACTGCACCTTGGGCGAGGCCTTTGAAGACCTGGACTGGGAGACGGAGAGGGGCCTGGAGGCTGTAGCCTGTGACACTGAGGGCTTCGTGCCACCCAAGGTCATGCTCATCTCCTCTAAAGTGCCCAAAGCTGAGTACATCCCCACCATCCTCCGCAGGGACGACCCCTCCATCATTCCCATCCTCTATGACCACGAGCACGCCACCTTCGAGGACATTCTGGGTGAGTACTCCGCCCCCCTGCCCTCTGGTCTTGGGGCTGCTGGGGGCGGCACTCACACCTCTGCCTCCGCAGAGGAGATAGAGAAGAAGCTGAACGTCTACCACAAGGGGGCCAAAATCTGGAAGATGCTGATTTTCTGCCAGGGCGGCCCAGGACACCTGTACTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGGACATGATCCACTTCTGGAAACGGTTGAGCCGCTTGATGAGCAAAGTGAACCCGGAGCCGAACGTCATCCACGTCATGGGCTGCTACGTCCTGGGGAACCCCAACGGGGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACCCCTTACAGGGTCACCTTCGAGTCCCCCCTGGAGCTGTCAGCCCAAGGGAAGCAGATGATCGAGACCTACTTTGACTTCCGGCTGTACCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGCCTTCGAGGACGTTCTGTGA

Related Sequences

bmy_13890T0 SequenceType object (3)

Length: 652 aa      View alignments
>bmy_13890T0
MGAVASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGADHLLADAYSGHDGSPEMQPAPQNKRRLSLISNGRYEGSLPEEAVSGKPAGEGPQPRVYTISGEPALLPGPEAEAIELAVVKGRHPRHHSQPLRASPAGSREDVSRPCHSWAGSRQGSKECPGCAQLAPSPSPQAFGLDQPPLPEAASRRKKLERMYSVDRVSDDIPIRTWFPKENLFSFQTATTTMQALGQARDLGLDHEGVLGPSERQGYSRACGNWAEDRARQAGTFCLAQRPGCPAGPCARASVPTSLSLLPAAKGSADSWWFPRVFRGYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQTPAPVHLVRLQAPPLTGSAFAAAFAERRERSFSRSWSDPTPMKADTSHDSRDSSDLQSSHCTLGEAFEDLDWETERGLEAVACDTEGFVPPKVMLISSKVPKAEYIPTILRRDDPSIIPILYDHEHATFEDILGEYSAPLPSGLGAAGGGTHTSASAEEIEKKLNVYHKGAKIWKMLIFCQGGPGHLYLLKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHVMGCYVLGNPNGEKLFQNLRTLMTPYRVTFESPLELSAQGKQMIETYFDFRLYRLWKSRQHSKLLAFEDVL*