Part of scaffold_921 (Scaffold)

For more information consult the page for scaffold_921 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM29 ENSTTRG00000011666 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 29

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011061, Bottlenosed dolphin)

Protein Percentage 85.86%
cDNA percentage 91.44%
Ka/Ks Ratio 0.33413 (Ka = 0.072, Ks = 0.2156)

BT.56841 ENSBTAG00000009419 (Cow)

Gene Details

tripartite motif-containing protein 29

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012396, Cow)

Protein Percentage 82.15%
cDNA percentage 87.23%
Ka/Ks Ratio 0.19495 (Ka = 0.0932, Ks = 0.4779)

TRIM29  (Minke Whale)

Gene Details

tripartite motif containing 29

External Links

Gene match (Identifier: BACU017352, Minke Whale)

Protein Percentage 90.28%
cDNA percentage 94.79%
Ka/Ks Ratio 0.58149 (Ka = 0.0492, Ks = 0.0845)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1743 bp    Location:66877..44437   Strand:-
>bmy_13945
ATGGAAGCTGCAGATGCCTCCAGGAGCGATGGGGCCAGCCTGGAATCCAGGGGTGCCCGCAGCTCACTGAGCCCCAAGGGCAGCCTGGAGAATGGGGCCAAGGCCGAAGGCAAAGAGGCCAAGATCACCAACGGGCACGGCAGGGAAGCGGCCGAGGGCAAGAGCCTGGGCGGCTCCCTGAAGCCAGGCGAGGGAAAGGGTTCCCTGTTCTTGGGCAACGAGCGGCAGCGGCCCATCATCCAGTTTTTTGAGTCTGTGGATGACAAGGGCTCCAACTACTTCAGCATGGACTCTGGAGAAGGCAAGAGGTTCCCCTACGCCAGGCTCCAGCTGGGGGCCACCAAGAAGCCACCCGTCATCTTTGCCGAGAAGGGGGAGCCGCACAGGTCCATCTTCTCAGAGCCCCACAAGCCCACGGTGTTCGTCCCGGAGCCTGGGGACCTCCAGCAGAACAGCTCCCCCCGGGCCGCCTCGAGCAACCTCCTGCGCTCCAAGTCGGGCTCCGAGGAGGTCCTGTGCGACTCGTGCATCGGCAACAAGCAGAAGGCCGTCAAGTCCTGCCTGGTGTGCCAGGCCTCCTTCTGTGAGCTGCACCTCAAGCCCCACCTGGAGGGCGCCGCCTTCCGTGACCACCAGCTGCTCGACCCCATCGGGGACTTCGAGGCCCGCAAGTGCCCCCTGCATGGCAAGACCATGGAACTCTTCTGCCAGACGGACCAGACCTGCATCTGCTACCTCTGCATGTTCCACGAGCACAAGAGCCACAGCACCGTGACCGTGGAAGAGGCCAAAGCAGAGAAGGAGACAGAGCTGTCACTGCAAAAGGAGCAGCTGCAGCTCAAGATCATCGAGATCGAAGATGAAGCTGAGAAGTGGCAGAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAATGAGAAGGCCACCCTGGAGCAGAACTTCCGAGACCTGATGCGGGACCTGGAGAAGCAAAAGGAGGAAGTGAAGGCTGCACTGGAGCAACGGGAGCAGGATGCTTCAAAACAAGTGGARGTGATCGTGGATGCTCTGGATGAGAGGGCCAAGGTGCTGCAGGATGACAAGCAGACCAGGGAGCAGCTACACAGCATCAGTGACTCCGTGCTGTTTCTGCAGGAATTTGGTGCCTTGATGAGCAGTTACTGCCTCCCCCCGCCCCTGCCCACCTATCATGTTCTATTGGAGAGGGAGGGCCTGGGGCAGTCGCTGGGCAACTTGAAGGACGACCTGCTTAATGTGTGCATGCGGCATATTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATCGAGAGGAACCACATGGAGGACGGGGGCGACCATCGCTACATGAACAGCTACAGTAACAGCTACAGCAACGAGTGGAGTGCTCCAGACACCGTGAAGAAATACTCCATGTACCTCACACCCAAGGGTGGGGCCAAGACATCATACCAGCCGGTGTCCCCCAGCCGCCTCTCCAAGGAGAAGACCTTCAACAATCTGTATGGCACCAAGGGTAACTACGCCTCCCGGGCCTGGGACTACTCCTCCACCATTCAGAGCTCCGATGACCTGCCTGCCGGGCAAGGCAACTCTTCCTTCTCCCTGAAAGGCTATCCTTCCCTCCTCAGGAGCCAGAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCCAGCAAGCAGAATTATCTGGTGAGTGAGGAGAGCCTGCCTGGGCATGAGCATGTGCAGAATGGGCACTGA

Related Sequences

bmy_13945T0 Protein

Length: 581 aa      View alignments
>bmy_13945T0
MEAADASRSDGASLESRGARSSLSPKGSLENGAKAEGKEAKITNGHGREAAEGKSLGGSLKPGEGKGSLFLGNERQRPIIQFFESVDDKGSNYFSMDSGEGKRFPYARLQLGATKKPPVIFAEKGEPHRSIFSEPHKPTVFVPEPGDLQQNSSPRAASSNLLRSKSGSEEVLCDSCIGNKQKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLDPIGDFEARKCPLHGKTMELFCQTDQTCICYLCMFHEHKSHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKSFTTNEKATLEQNFRDLMRDLEKQKEEVKAALEQREQDASKQVEVIVDALDERAKVLQDDKQTREQLHSISDSVLFLQEFGALMSSYCLPPPLPTYHVLLEREGLGQSLGNLKDDLLNVCMRHIEKMCKADLSRNFIERNHMEDGGDHRYMNSYSNSYSNEWSAPDTVKKYSMYLTPKGGAKTSYQPVSPSRLSKEKTFNNLYGTKGNYASRAWDYSSTIQSSDDLPAGQGNSSFSLKGYPSLLRSQSPKAQPQTWKSSKQNYLVSEESLPGHEHVQNGH*