Sequence detailsbmy_13950 (Coding sequence)

Part of scaffold_921 (SequenceType object (1))

For more information consult the page for scaffold_921 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARHGEF12ENSTTRG00000011693 (Bottlenosed dolphin)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 12

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011097, Bottlenosed dolphin)

Protein Percentage 77.61%
cDNA percentage 80.13%
Ka/Ks Ratio 0.54081 (Ka = 0.0671, Ks = 0.1242)

BT.52588ENSBTAG00000021343 (Cow)

Gene Details

rho guanine nucleotide exchange factor 12

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028453, Cow)

Protein Percentage 86.36%
cDNA percentage 87.9%
Ka/Ks Ratio 0.34642 (Ka = 0.0927, Ks = 0.2675)

Additional orthologs identified in other species via the OPTIC pipeline.

ARHGEF12 (Human)   Arhgef12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3897 bp    Location:255004..518553   Strand:+
Raw sequence 
>bmy_13950
ATGAGTGGCACACAGTCTACTATCACCGACAGGTTTCCCCTCAAAAAACCTATAAGGCATGGAAGTATTTTGAACCGAGAGTCACCAACAGATAAGAAGCAGAGAGTTGAGCGCAGTACATCCCATGATTTTGACCCCACAGATAGCTCCTCCAAGAAGACAAAGTCTAGTTCAGAGGAGAGTAGATCCGAGATATATGGTCTTGTTCAGCGTTGTGTGATCATCCAGAAGGATGACAATGGATTTGGGCTGACGATGGAGCAGCCATGCGGGCTGGTGTACAGACAGGTGATCGAATCATCAAGAAAAAGGCAGTTACAAGCGGGTTCCTATGTAGCTCTCACTGTTCAGGGACGCCCACCTGGGTCGCCCCAGTTTCCACTTGCTGATTCTGAAGTAGAACCGTCAGTCGTTGGACATATGTCTCCCATCATGACATCCCCTCATTCACCTGGAGCATCTGGGAATATGGAGAGAATTACTAGTCCTGTGCTCATGGGGGAGGAAAACAATGTGGTTCATAACCAGAAAGTAGAAATTCTGAGAAAAATGTTACAGAAAGAACAGGAACGGCTACAGTTATTGCAGGAAGATTACAGCCGAACACCTGCCCAAAGATTGCTAAAAGAGATCCAAGAGGCCAAGAAACACATTCCTCAACTGCAAGAGCAGTTATCCAAAGCCACAGGCTCTGCTCAGGATGGAGCTGCAGTTACATCCTCCAAGCCATTAGGCGATGGGCTAGCAGTCAGTGAAATAGAAGCAGATCCTGGTGATGGACTAGGCAGAACTGACTATGGCAGTGGAGATGCTTCTCGGCCCAGTAGTGACAGTGCAGATAGTCCCAAGAGTGGCCTGAAAGAGAGGATTTATCTAGAGGAAAACCCAGAGAAAAGTGAAGTAATTCAGGACACTGACACTCAATCACTTATTGGGAGTCCCTCTACCCGTATAGCACCTCATATTATTGGAGCAGAGGATGATGACTTTGGTACTGAACATGAACAGATCAATGGGCAGTGCAGCTGTTTCCAGAGCATTGAACTGCTAAAATCTCGCCCTGCTCACTTGGCTGTTTTCTTACACCATGTAGTTTCACAGTTTGACCCTGCAACACTGCTCTGTTATCTCTATTCAGACCTGTATAAACAGACCAATTCCAAGGAGACTCGTCGTGTCTTCCTTGAGTTTCATCAGTTCTTCCTGGATCGATCTGCACACCTGAAAGTTTCTGTTCCTGATGAAATATCAGTAGATCTAGAAAAAAGAAGACCCGAGCTTATTCCTGAGGATCTACATCGCCACTATATCCAAACTATGCAAGAAAGAGTCCACCCAGAAGTTCAAAGGCACTTGGAAGATTTTCGACAGAAACGTAGCATGGGGCTGACCTTGGCTGAAAGCGAACTGACTAAAATTGATGCAGAGAGAGACAAGGACCGGGTAACTCTGGAGAAGGAACGGGCATGTGCAGAGCAGATTGTTGCCAAAATTGAAGAAGTGTTGATGACTGCTCAGGCTGTAGAAGAAGATAAGAGTTCAACAATGCAATATGTTATTCTCATGTACATGAAGCATTTAGGAGTAAAAGTGAAAGAACCTCGAAATTTGGAGCACAAGCGAGGTCGGATTGGATTCCTTCCAAAAATCAAGGCCTACTGGAGAGTCAGTCTCCTAGAGAGGGCTGCAGGAGAAGTAGGGGTGGGCGTGCTGCTGTGGGGAGAGAAATTAGCTCATATAGTGGCCTTCAAGGTGACAGTTGGCAGAGCCATGGAACTACAGAAGCAGCGCCACCCTAAGCACATATCCACACCCTCATCTGTGAGTCCTGAACCTCAGGACTCTGCTAAGTTGCGCCAGAGTGGATTAGCAAGTGAAGGAGCAGACATTGGGTACCTGCCAGCCAATTCCATGTCCTCCGTGGTTTCAGGGGCCACTCTTTCCCAGGAAGGAGGGAAAGAGAATGATATGGGATCAAAGCAAGTTGGAGAAACGCCAGCATCTGGAGACTCCTTAGATGGCACACCTCGTACTCCCAGTACCATCTTTGACTTCCCACCTCCTCCATTAGACCAAGTGCAGGAGGAGGAATGGGAAGTGGAAAGGGTGACTGAACATGGGACACCAAAGCCCTTTCGAAAGTTTGACAGCATAGCTTTTGGAGAAAGTCAAAGTGAGGATGAACAGTTTGAAAATGACTTAGAGACAGATCCACCCAACTGGCAACAGCTCGTTAGTCGAGAAGTGTTACTGGCACTAAAGCCTTGCGAGATCAAAAGACAGGAAGTAATTAATGAATTGTTCTACACTGAAAGAGCTCATGTTCGAACATTGAAGGTTCTAGATCAAGTGTTCTATCAGCGAGTTTCCAGAGAAGGAATTCTGTCACCTTCAGAACTACGGAAAATTTTTTCAAACTTAGAAGATATTCTTCAACTTCACATTGGGTTGAATGAGCAAATGAAGGCTGTTCGAAAGAGGAATGAGACATCTGTTATTGATCAGATTGGGGAAGATTTGCTGACTTGGTTCAGTGGACCCGGGGAGGAAAAGTTGAAACATGCCGCTGCTACCTTTTGCAGTAACCAACCCTTTGCCCTGGAAATGATCAAGTCTCGTCAGAAAAAGGACTCTCGATTCCAGACTTTTGTGCAAGATGCTGAGAGTAATCCACTGTGTCGTCGTCTGCAGCTGAAAGATATCATTCCCACCCAAATGCAGAGGCTGACTAAGTACCCTCTTCTGTTGGATAACRTTGCCAAATACACAGAATGGCCAACAGAAAGGGAGAAGGTGAAGAAAGCTGCAGATCACTGTCGTCAGATCTTAAATTATGTAAATCAGGCTGTTAAGGAGGCAGAAAACAAGCAGAATTTGGATTTAACAAAAAGGAAGATGATTCATGAAGGGCCATTGGTTTGGAAGGTGAAYAGAGATAAAACTATTGGATGCTTAGAGTCTCTGAATAATTTTCTGCATTTGAAAATTTTCTGCATATTACTTTTATCTTTACGTCATGTTSAAATCATTGATGRCACTAGTGAAGACAATGAATTGGAGCTGGCAGGACCTCATCTGTCGGATGGCTGCATCAGTGAAGGAGCAGTCCACAAAGCCAATTCCACTGCCACAGTCACCACCTTGCGAGTGAACAGAGATTTGGGATTAGAGTCTCCTTTGATGTCRTCAAAACCTCAATCTCATTCACTGGATACCTCTGGGAAATCGGAGGTGGATGATCTCTTTGTGGCTGAGAGACAGTTTGCAAAGGAGCAGCATGCAGATGGAACTGTAAAGGAAGTTGGAGTCAATTATCAAATCACAATCCCAGATCCACACTTGCCTGTCTCAGAAGAACGGTGGGCATTGGATGCACTAAGGAATTTGGGTTTGTTGAAGCAGTTGCTGGTACAACAGCTGGGTTTGACTGAGAAGAGCACTCAGGAAGACTGGCCACATTTCCCAAGATGCAGGACAGCCTCTCTGGGGGTGCAGGCCGACAGTGGAACCCAGAACCCTGAAAATATTAAGGCCTGTCGTCCTTGTGAAGGACAGATGCCCTTGAGAACTGGCGCTGGTGACWTTGCAGCTCGTTACGGTGCACGGACTTCAACGGAACCTTCTGCTGCACGGGACTCAGTGGTACTGGCATTCCAAGATAGCCAGGCAAGTAGCATTTTAGTAATGGACCGCATGATTCTGACCCCAGAGATGCCTCCCGCAGAGCCAGAAGGGGGTCTTGATGAGAGTGGAGAGCACTTTTTTGATGCCCGTGAAGCACATAGTGATGATAATCCATCAGAAGGTGATGGAGCAGTTAAAAAGGAAGAGAAGGATGTTAATTTGCGCATCTCAGGCAAGTTCTTTTCACATTTAAACTTTGATTTCAATCATTGA

Related Sequences

bmy_13950T0 SequenceType object (3)

Length: 1299 aa      View alignments
>bmy_13950T0
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQRVERSTSHDFDPTDSSSKKTKSSSEESRSEIYGLVQRCVIIQKDDNGFGLTMEQPCGLVYRQVIESSRKRQLQAGSYVALTVQGRPPGSPQFPLADSEVEPSVVGHMSPIMTSPHSPGASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYSRTPAQRLLKEIQEAKKHIPQLQEQLSKATGSAQDGAAVTSSKPLGDGLAVSEIEADPGDGLGRTDYGSGDASRPSSDSADSPKSGLKERIYLEENPEKSEVIQDTDTQSLIGSPSTRIAPHIIGAEDDDFGTEHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRRVFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHLEDFRQKRSMGLTLAESELTKIDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDKSSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKAYWRVSLLERAAGEVGVGVLLWGEKLAHIVAFKVTVGRAMELQKQRHPKHISTPSSVSPEPQDSAKLRQSGLASEGADIGYLPANSMSSVVSGATLSQEGGKENDMGSKQVGETPASGDSLDGTPRTPSTIFDFPPPPLDQVQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLALKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQLHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNXAKYTEWPTEREKVKKAADHCRQILNYVNQAVKEAENKQNLDLTKRKMIHEGPLVWKVNRDKTIGCLESLNNFLHLKIFCILLLSLRHVZIIDXTSEDNELELAGPHLSDGCISEGAVHKANSTATVTTLRVNRDLGLESPLMSSKPQSHSLDTSGKSEVDDLFVAERQFAKEQHADGTVKEVGVNYQITIPDPHLPVSEERWALDALRNLGLLKQLLVQQLGLTEKSTQEDWPHFPRCRTASLGVQADSGTQNPENIKACRPCEGQMPLRTGAGDXAARYGARTSTEPSAARDSVVLAFQDSQASSILVMDRMILTPEMPPAEPEGGLDESGEHFFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGKFFSHLNFDFNH*