Part of scaffold_931 (SequenceType object (1))

For more information consult the page for scaffold_931 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RXRGENSTTRG00000003653 (Bottlenosed dolphin)

Gene Details

retinoid X receptor, gamma

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003428, Bottlenosed dolphin)

Protein Percentage 95.25%
cDNA percentage 95.48%
Ka/Ks Ratio 0.3043 (Ka = 0.0035, Ks = 0.0115)

RXRGENSBTAG00000016801 (Cow)

Gene Details

Retinoic acid receptor RXR-gamma

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022350, Cow)

Protein Percentage 91.67%
cDNA percentage 90.49%
Ka/Ks Ratio 0.23088 (Ka = 0.0592, Ks = 0.2563)

RXRG (Minke Whale)

Gene Details

retinoid X receptor, gamma

External Links

Gene match (Identifier: BACU014437, Minke Whale)

Protein Percentage 96.85%
cDNA percentage 97.32%
Ka/Ks Ratio 0.42241 (Ka = 0.0214, Ks = 0.0506)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1134 bp    Location:456001..350333   Strand:-
>bmy_13963
ATGAAACTGCTTTCCATCGGTCTGTGTGACTCTGTGGGTGGGAGAATCATGGGCCTCTTGTTCCCTCCCCTGCTGCTGCCCCCAATTCCATTTCCAGGGTCGCTGCCATCGGTCGGAATCTGGGAGTTGGTGGAGGGGGTCACAGTCACCCAGGCCTGGGGACATGAGGGCTATGCCCCTGTGGCCCTGGCTATTGATCTGACACGATTCAAGCCTCTCATCACCTTTGATCTTCTCCTTACAGGTTCCCCCAGCCACTCTGGCTCCACGTCCATGAGCCCGTCGGCAGCCTTGTCCACAGGGAAGCCCATGGACAGCCACCCCAGCTACACTGACACCCCAGTGAGTGCCCCACGGACTCTGAGTGCAGTGGGGACCCCCCTCAATGCCCTGGGCTCTCCATATCGAGTCATCACTTCTGCCATGGGCCCACCCTCAGGAGCTCTTGCAGCCCCTCCAGGAATCAATTTGGTTGCCCCGCCCAGCTCTCAGCTAAATGTGGTCAACAGTGTCAGCATTTCAGAGGACATCAAACCCTTACCAGGGCTTCCTGGCATTGGAAACATGAACTACCCATCCACTAGCCCTGGATCTCTGGTTAAACACATCTGTGCCATCTGTGGGGACAGATCCTCAGGAAAGCACTACGGTGTGTACAGTTGTGAAGGCTGCAAAGGGTTCTTCAAGAGAACCATAAGGAAAGACCTCATCTACACGTGTCGGGATAATAAAGACTGCCTCATTGACAAGCGTCAGCGCAACCGCTGCCAGTACTGTCGCTATCAGAAGTGCCTTGTCATGGGCATGAAGAGGGAAGAAAGGCAGAGAAGCCGGGAGCGGGCTGAGAGTGAGGCAGAATGTGCCAGTAGTGGCCATGAAGATATGCCCGTGGAGAGGATTCTGGAGGCTGAACTTGCTGTTGAACCAAAGACAGAATCCTACGGTGACATGAACATGGAGAATTCGACAAATGACCCCGTCACCAACATATGCCATGCTGCTGACAAGCAGCTCTTTACTCTCGTTGAATGGGCCAAGCGTATTCCCCACTTCTCTGACCTCACCTTGGAGGACCAGGTCATTCTGCTCCGGGCAGGTTTCCAGGGAAGAGACTGTATTATTGACATTACCTAA

Related Sequences

bmy_13963T0 SequenceType object (3)

Length: 378 aa      View alignments
>bmy_13963T0
MKLLSIGLCDSVGGRIMGLLFPPLLLPPIPFPGSLPSVGIWELVEGVTVTQAWGHEGYAPVALAIDLTRFKPLITFDLLLTGSPSHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVGTPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREERQRSRERAESEAECASSGHEDMPVERILEAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGFQGRDCIIDIT*