Sequence details bmy_13972 (Coding sequence)

Part of scaffold_928 (Scaffold)

For more information consult the page for scaffold_928 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NRIP1 ENSTTRG00000006185 (Bottlenosed dolphin)

Gene Details

nuclear receptor interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005851, Bottlenosed dolphin)

Protein Percentage 85.35%
cDNA percentage 87.34%
Ka/Ks Ratio 0.35144 (Ka = 0.0311, Ks = 0.0886)

NRIP1 ENSBTAG00000047293 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054302, Cow)

Protein Percentage 90.57%
cDNA percentage 91.35%
Ka/Ks Ratio 0.20706 (Ka = 0.048, Ks = 0.232)

NRIP1  (Minke Whale)

Gene Details

nuclear receptor interacting protein 1

External Links

Gene match (Identifier: BACU000083, Minke Whale)

Protein Percentage 98.36%
cDNA percentage 98.5%
Ka/Ks Ratio 0.20154 (Ka = 0.0072, Ks = 0.0357)

Additional orthologs identified in other species via the OPTIC pipeline.

NRIP1 (Human)   Nrip1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3471 bp    Location:408755..405285   Strand:-
Raw sequence 
>bmy_13972
ATGACTCATGGAGAAGAGCTTGGCTCTGATGTGCACCAGGATTCTATTGTTTTAACTTACCTAGAAGGATTACTAATGCATCAGGCAGCAGAGGGATCAGGTACTGCCATCGACAGAAAGTCTGCTGGCTGTAATGAAGAAGATCAGAACTTTCACATTTCTGGTAATGCATATCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACACATACATATCAGGGATCTGGCATGCTGCATCTCAAAAAAGCCAGACTCTTGCAGTCTTCTGAGGATTGGAATGCAGCGAAGCGGAAGAGGCTGTCTGATTCCATCGTAAATTTAAACGTAAAGAAGGAAGCTTTGCTGGCTGGCATGGCTGACAGTGTGCCCAAAGGCAAACAGGATAACACGGTACTGGCCTCTTTGCTTCAGTCGTTCAGCTCTAGGCTGCAGACTGTTGCTCTGTCACAACAGATTAGGCAGAGCCTCAAGGAGCAAGGATACGCCCTCAGTCATAACTCTCTAAAAGTGGAGAAAGATTTAAGGTGCTACGGTGTCGCATCAAGTCACTTAAAAACTTTGCTGAAGAAAAGTAAAGCTAAAGATCAGAAGCCTGACACCAGTCTCCCTGACGTAACTAAGAACCTCATCAGAGATAGGTTCRTAGAGTCACCTCATCATGTGGGACAGAGTGGCACAAAGGTCATGAGTGAGCCCTTGTCATGTGCTGCAAGATTACAGGCTGTCGCAAGCATGGTGGAAAAGAGGGCTAGTCCTGCCACTTCACCCAAACCAAGTGTTGCTTGTAGCCAATTAGCATTACTCCTTTCAAGCGAAGCCCATTTACAGCAGTATTCTCGAGAACACGCTTTAAAAACACAAAATGCAAATCAGGCGGCAAGTGAAAGACTTGCTGCTATGGCCAGATTACAAGARAATGGCCAGAAGGATGTGGGCAGTTTCCAATTCTCTAAAGGAATGTCGAGCCATCTTAATGGTCAGGCAAGAGCATCATCAAACAAACTAATGGCTAGCAAAAGTACAACATTTCAAAATCCGATGGGTATTGTTCCTTCTCCCCCCAAAAATGCAGGCTATAAGAACTCACTGGAAAGAAGCAATGCAAAACAAGCTGCTAATAACAGTTTGCTTTTACATCTTCTTAAAAGCCAGACCACACCTAAGCCAATGAACGGACACAATCAGAGTGAGAAAGGAAGCCTTTTTGAGGAGGGCAGTACACCTACAACGATTGATGAATACTCAGATAACAATCCTAGTTTTACAGATGATAGCAGTGGTGATGAAAGTTCATATTCCAACTGTGTTCCCATAGACTTGTCTTGCAAACACCGAATCGAAAAACCAGAACCTGACCGGCCTGTTTCTCTGGATAACTTAACTCAGTCCTTGCTAAACACTTGGGATCCAAAAGTCCCCGAAGTAGACATCAAAGAAGATCAAGATACCTCAAAGAATTCTAAGCTAAATGCGCACCAGAAAGTAACCCTTCTTCAGTTGCTACTTGGCCATAAGAATGAAGAAAATGTAGAAAGAAACAGCAGCCCTCAGGAACCACACAGTGATGGGACAAAGTTCAGCACACATAATTACACGCGGACTTCTGTCATAGAAAGCCCTAGTACCAGCAGGACTACTCCAGTGAGCACTCCACCATTACTTGCATCCACCAAAGCCGAGTCTCCCATCAACCTTTCCCAACACTCTCTGGTCATCAAATGGAATTCCCCACCGTATGCCTGTGGCCCTCAGTCTGAAAAGCCAGCGAATACCGCATCGAACCACTTGATGGACCTTACAAAAAGCAAAGAATCGCAAGGGGAGAAACCAGTCCAAAATGAAGGCACGCAGAACTCTGCCACTTTCAGTGCCAGTAAACTGTTACAAAATCTAGCGCAATGTGGAATGCAGTCTTCCGTGTCAGGGGAAGAGCAGAGACCCAGTAAACAGCTGCTGAGTGTAAACACAGAGAAACCTACAGGTATGACTGATAGACTAAATAGCCCTCTGCTCTCAAATAAAACAAATGCAGTTGAAGAAAATAAAGCATTTGGCAGTCACGCAACAGGTCCTGAACCAGGACTCTCTGGTTCTGAAATAGAAAATCTGCTTGAAAGGCGCACCGTCCTCCAGTTGCTGCTGGGAAACCCCAACAAAGGGAAGCCCGAAAAGAAAGAGAAGATGCCCTTAAGAGATGAAAGTACTCAGGAACATACAGATAGAGCTTTAAGTGAACAAATACTGATGGTGAAAATAAAATCTGAGCCTTGCGATGACTTGCATACGCATACCACAAATGTGCCCTTGAGCCACGACGCTCAGGGCGCCCCCTTCTTAGGCGTGGCTCCTGCCTTGCCGGGAAGCACAGCTGTCTTACCAGCATCCGAGGACTTCAAATCGGAGCCCGTCTCACCTCAGGATTTTTCTTTCTCTAAGAACGGTCTGCTAAGTCGACTGCTGAGACAAAACCAAGAGAGTCACCTGGCTGATGACCTGGACAGCAGTCACAGAAATAGTGAACTGACACTTCTAGAATCAAAGAATCTTTGCATGGTCCCTAAGAAAAGGAAGCTTCATACTGAGCCGTTAGAAAATCCATTTAAAAAGATGAAAAATAACATAGTCGATGCTGCAAACAGCCACAGTGCCCCGAAGGTGCTGTATGGGTCCTTGCTTAACCAGCAAGAGCTGAAGCTTAGCAGAAATGATCTTGAGTTTAAATATCCTGCCAGTCATGGTTCAGCCAGTGAAAGTGAGCCCAGGAATTGGGCCAGAGAGAGCAAAAGCTTCAACGTTCTGAAACAGCTGCTTCTCTCGGAAAACTGTGTGAGAGATTTGTCTCAGCACAGGAGTAACTCTGTCGTCGACAGTAAAAAAAAAGGACACAGAAACAGTGTGACCAATAGCAAGCCTGAATTCAGCGTTTCTTCTTTAAACGGACTGATGTACAGTGCTGCTCAGCCCAGCAGCTGCATGGGCCACAGGACATTTCCATACCCAGGTGTAGGAAAGCCTCCTGTGAGCCCCCCTTTCCCTGAGCACTTGGGCTGCGCAGGATCTAGACCAGAACCTGGGCTTGCGAATGGGTGTTCCGTGCCCAGTGAGAAGGGACCCATCAAGTGGGTTATCACAGATGTGGATAAGAGTGAGTATGAGAAAGACTCTCCGAGACTGACCAAAACTAACCCAATACTGTATTACATGCTCCAGAAAGGAGGCAATTCTGTTACCAGTCGAGAAACACAGGACAAGGACATTTGGAGGGAGCCTTCATCTGCTGAAAGTATCTCACAGGTTACAATCAAAGAAGAGCTACTTCCTGCTGCAGACACTAAAGCTTCTTTCTTTAATTTAAGAAGCACTTACAATAGCCATATGGGAAATAACGCCTCTCGCCCACACAGTGCAAATGGAGAAGTTTATGGACTTCTGGGAAACATGCTAACAATAAAAAAGGAATCAGAATAA

Related Sequences

bmy_13972T0 Protein

Length: 1157 aa      View alignments
>bmy_13972T0
MTHGEELGSDVHQDSIVLTYLEGLLMHQAAEGSGTAIDRKSAGCNEEDQNFHISGNAYPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIVNLNVKKEALLAGMADSVPKGKQDNTVLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHNSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTSLPDVTKNLIRDRFXESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQFSKGMSSHLNGQARASSNKLMASKSTTFQNPMGIVPSPPKNAGYKNSLERSNAKQAANNSLLLHLLKSQTTPKPMNGHNQSEKGSLFEEGSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRIEKPEPDRPVSLDNLTQSLLNTWDPKVPEVDIKEDQDTSKNSKLNAHQKVTLLQLLLGHKNEENVERNSSPQEPHSDGTKFSTHNYTRTSVIESPSTSRTTPVSTPPLLASTKAESPINLSQHSLVIKWNSPPYACGPQSEKPANTASNHLMDLTKSKESQGEKPVQNEGTQNSATFSASKLLQNLAQCGMQSSVSGEEQRPSKQLLSVNTEKPTGMTDRLNSPLLSNKTNAVEENKAFGSHATGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKPEKKEKMPLRDESTQEHTDRALSEQILMVKIKSEPCDDLHTHTTNVPLSHDAQGAPFLGVAPALPGSTAVLPASEDFKSEPVSPQDFSFSKNGLLSRLLRQNQESHLADDLDSSHRNSELTLLESKNLCMVPKKRKLHTEPLENPFKKMKNNIVDAANSHSAPKVLYGSLLNQQELKLSRNDLEFKYPASHGSASESEPRNWARESKSFNVLKQLLLSENCVRDLSQHRSNSVVDSKKKGHRNSVTNSKPEFSVSSLNGLMYSAAQPSSCMGHRTFPYPGVGKPPVSPPFPEHLGCAGSRPEPGLANGCSVPSEKGPIKWVITDVDKSEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREPSSAESISQVTIKEELLPAADTKASFFNLRSTYNSHMGNNASRPHSANGEVYGLLGNMLTIKKESE*