Sequence detailsbmy_13996 (Coding sequence)

Part of scaffold_951 (SequenceType object (1))

For more information consult the page for scaffold_951 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDAP1ENSTTRG00000003004 (Bottlenosed dolphin)

Gene Details

PDGFA associated protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002818, Bottlenosed dolphin)

Protein Percentage 92.41%
cDNA percentage 93.04%
Ka/Ks Ratio 0.25929 (Ka = 0.047, Ks = 0.1813)

PDAP1ENSBTAG00000044040 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053400, Cow)

Protein Percentage 91.77%
cDNA percentage 88.19%
Ka/Ks Ratio 0.0953 (Ka = 0.0494, Ks = 0.5184)

PDAP1 (Minke Whale)

Gene Details

PDGFA associated protein 1

External Links

Gene match (Identifier: BACU012111, Minke Whale)

Protein Percentage 91.77%
cDNA percentage 93.46%
Ka/Ks Ratio 0.35814 (Ka = 0.0504, Ks = 0.1408)

Additional orthologs identified in other species via the OPTIC pipeline.

PDAP1 (Human)   Pdap1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 477 bp    Location:604889..614471   Strand:+
Raw sequence 
>bmy_13996
ATGCCTAAAGGAGGGAGAAAGGGAGGCCACAAAGGCCGGGCAAGGCAGTACACGAGCCCCGAGGAGATCGACGCACAGCTCCAGGCTGAAAAGCAGAAGGCCAGGGAAGAAGAGGAACAAGGAGAAGAAGGTGGAGATGGGGCTGCAGGTGACCCCAAAAAGGAGAAAAAGTCCCTAGACTCAGATGASAGCGAGGATGAAGAAGATGATTACCAGCTGATAATGGTGGGGAAGACGGCCCCTGTGACACCATTTTTCCCAAACAGAGAAGAAATCGAGAAGCAGAAAGCAAAAGAGCGTTACATGAAAATGCATTTAGCAGGGAAGACGGAGCAAGCCAAGGCCGACCTTGCCCGGCTGGCGATCATCCGGAAACAGCGGGAGGAGGCTGCCAGGAAGAAAGAAGAAGAGAGGAAAGCAAAAGATGATGCAGCTTTGTCAGGAAAACGAATGCAGTCGCTCTCCCTGAATAAGTAG

Related Sequences

bmy_13996T0 SequenceType object (3)

Length: 159 aa      View alignments
>bmy_13996T0
MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQGEEGGDGAAGDPKKEKKSLDSDXSEDEEDDYQLIMVGKTAPVTPFFPNREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKAKDDAALSGKRMQSLSLNK*