Part of scaffold_947 (Scaffold)

For more information consult the page for scaffold_947 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR1H2 ENSTTRG00000002416 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 1, group H, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002263, Bottlenosed dolphin)

Protein Percentage 96.27%
cDNA percentage 95.65%
Ka/Ks Ratio 0.19895 (Ka = 0.0254, Ks = 0.1276)

BT.44371 ENSBTAG00000003264 (Cow)

Gene Details

oxysterols receptor LXR-beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004229, Cow)

Protein Percentage 90.74%
cDNA percentage 88.12%
Ka/Ks Ratio 0.15588 (Ka = 0.0666, Ks = 0.4275)

NR1H2  (Minke Whale)

Gene Details

nuclear receptor subfamily 1, group H, member 2

External Links

Gene match (Identifier: BACU008289, Minke Whale)

Protein Percentage 96.76%
cDNA percentage 96.22%
Ka/Ks Ratio 0.21682 (Ka = 0.0231, Ks = 0.1065)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1563 bp    Location:171546..178442   Strand:+
>bmy_14007
ATGGGTCCCGAACTCTTCCGCCAGCCCTCAGTGGAGCTATCCGGAAGTGACGCACGGTGGGGTTGCCGGAAGAAGTGGCGAACTCGCGCCGCCCCCGGCTGTTTCCAGGGCAACGGGAGTAGGGGACCCCCACGAGAGGCCGCCCACGAGACCCTCGCGCGCAGCCATGAGCCCCGCCCCCCACTGGTGTTCGGAGAGGGGCGGGACCTGGAGAGAGGTGTGGGGGCGGAGTATGATGGGAGGAGGCTGCTCCGTGACCCCACCATGTCCACCCCCGCCACGAGTTCCCTGGACACCCCCTTGCCTGGAAATGGCCCTAGCACCCCCTCTTCTTCACCTGATGGAAAGGAGGATGGCTCTGAGCCGTGCCCGGGGGCTGATCCTGATGTCCCAGGCACTAATGGGGCCAACTCAGCTTCCGTCGTGGTCATCCTAGACACAGCAGAGGAGCCGGAGCGCAAGCGAAAGAAGGGACCRGCTCCAAAGATGCTGGGCGACGAGCTGTGCCAGGTGTGCGGGGACACGGCCTCTGGCTTCCACTACAACGTGCTCAGCTGCGAAGGCTGCAAGGGCTTCTTCAGGCGAAGTGTGATCCGAGGCGGGGCCGGGCGCTACGCCTGCCGGGGCGGTGGAACCTGCCAGATGGATGCCTTCATGCGGCGCAAGTGCCAGCAATGCCGGCTGCGAAAATGCAAGGAGGCTGGGATGCGGGAGCAGTGCGTCCTCTCCAAAGAACAGATCCGGAAGAAGAAGATTCGGAAGCAGCAGCAGCAGTCGTCACCCACAGGGCTGGGAGTCGGCAGCAGCTCAGCCTCTGGGCCTGGGGCCTCCCCTGGAGGGTCTGACGGGGGTGGCCAGGGCTCCGGGGAAGGCGAGGGTGTCCAGTTAACAGCCGCTCAGGAACTAATGATCCAGCAATTGGTGGCTGCTCAGCTGCAGTGCAATAAACGCTCCTTCTCTGACCAGCCTAAAGTCACGCCCTGGCCCTTGGGCGCAGACCCGCAGTCCCGTGATGCTCGCCAGCAGCGTTTCGCCCACTTCACGGAGCTGGCCATCATCTCAGTCCAGGAGATCGTGGACTTCGCCAAGCAGGTGCCTGGCTTCCTGCAGCTGGGTCGCGAGGACCAGATCGCCCTCCTGAAGGCGTCTACCATTGAGGGCCGGGGCGGTTCATCGGTTCATCGGGCCGGGCCTCCCACCTCCGCAGGCCTGCAGGTGGAATTCATCAACCCCATCTTCGAGTTCTCGCGGGCCATGAGGCGCCTGGGCCTGGACGATGCTGAGTACGCCCTCCTCATCGCCATCAACATCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGAGCCGAGTCGAGGCGCTGCAGCAGCCCTACGTGGACGCGCTGCTGTCCTACACCCGCATCAAGAGGCCACAGGACCAGCTGCGTTTCCCCCGCATGCTGATGAAGCTCGTGAGCCTGCGCACGCTCAGCTCCGTGCACTCGGAGCAGGTCTTCGCCCTGCGGCTCCAGGACAAGAAGCTGCCGCCTTTGCTATCGGAGATCTGGGACGTCCACGAATGA

Related Sequences

bmy_14007T0 Protein

Length: 521 aa      View alignments
>bmy_14007T0
MGPELFRQPSVELSGSDARWGCRKKWRTRAAPGCFQGNGSRGPPREAAHETLARSHEPRPPLVFGEGRDLERGVGAEYDGRRLLRDPTMSTPATSSLDTPLPGNGPSTPSSSPDGKEDGSEPCPGADPDVPGTNGANSASVVVILDTAEEPERKRKKGPAPKMLGDELCQVCGDTASGFHYNVLSCEGCKGFFRRSVIRGGAGRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSKEQIRKKKIRKQQQQSSPTGLGVGSSSASGPGASPGGSDGGGQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEGRGGSSVHRAGPPTSAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPSRVEALQQPYVDALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE*