Part of scaffold_947 (SequenceType object (1))

For more information consult the page for scaffold_947 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR1H2ENSTTRG00000002416 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 1, group H, member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002263, Bottlenosed dolphin)

Protein Percentage 96.27%
cDNA percentage 95.65%
Ka/Ks Ratio 0.19895 (Ka = 0.0254, Ks = 0.1276)

BT.44371ENSBTAG00000003264 (Cow)

Gene Details

oxysterols receptor LXR-beta

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004229, Cow)

Protein Percentage 90.74%
cDNA percentage 88.12%
Ka/Ks Ratio 0.15588 (Ka = 0.0666, Ks = 0.4275)

NR1H2 (Minke Whale)

Gene Details

nuclear receptor subfamily 1, group H, member 2

External Links

Gene match (Identifier: BACU008289, Minke Whale)

Protein Percentage 96.76%
cDNA percentage 96.22%
Ka/Ks Ratio 0.21682 (Ka = 0.0231, Ks = 0.1065)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1563 bp    Location:171546..178442   Strand:+
>bmy_14007
ATGGGTCCCGAACTCTTCCGCCAGCCCTCAGTGGAGCTATCCGGAAGTGACGCACGGTGGGGTTGCCGGAAGAAGTGGCGAACTCGCGCCGCCCCCGGCTGTTTCCAGGGCAACGGGAGTAGGGGACCCCCACGAGAGGCCGCCCACGAGACCCTCGCGCGCAGCCATGAGCCCCGCCCCCCACTGGTGTTCGGAGAGGGGCGGGACCTGGAGAGAGGTGTGGGGGCGGAGTATGATGGGAGGAGGCTGCTCCGTGACCCCACCATGTCCACCCCCGCCACGAGTTCCCTGGACACCCCCTTGCCTGGAAATGGCCCTAGCACCCCCTCTTCTTCACCTGATGGAAAGGAGGATGGCTCTGAGCCGTGCCCGGGGGCTGATCCTGATGTCCCAGGCACTAATGGGGCCAACTCAGCTTCCGTCGTGGTCATCCTAGACACAGCAGAGGAGCCGGAGCGCAAGCGAAAGAAGGGACCRGCTCCAAAGATGCTGGGCGACGAGCTGTGCCAGGTGTGCGGGGACACGGCCTCTGGCTTCCACTACAACGTGCTCAGCTGCGAAGGCTGCAAGGGCTTCTTCAGGCGAAGTGTGATCCGAGGCGGGGCCGGGCGCTACGCCTGCCGGGGCGGTGGAACCTGCCAGATGGATGCCTTCATGCGGCGCAAGTGCCAGCAATGCCGGCTGCGAAAATGCAAGGAGGCTGGGATGCGGGAGCAGTGCGTCCTCTCCAAAGAACAGATCCGGAAGAAGAAGATTCGGAAGCAGCAGCAGCAGTCGTCACCCACAGGGCTGGGAGTCGGCAGCAGCTCAGCCTCTGGGCCTGGGGCCTCCCCTGGAGGGTCTGACGGGGGTGGCCAGGGCTCCGGGGAAGGCGAGGGTGTCCAGTTAACAGCCGCTCAGGAACTAATGATCCAGCAATTGGTGGCTGCTCAGCTGCAGTGCAATAAACGCTCCTTCTCTGACCAGCCTAAAGTCACGCCCTGGCCCTTGGGCGCAGACCCGCAGTCCCGTGATGCTCGCCAGCAGCGTTTCGCCCACTTCACGGAGCTGGCCATCATCTCAGTCCAGGAGATCGTGGACTTCGCCAAGCAGGTGCCTGGCTTCCTGCAGCTGGGTCGCGAGGACCAGATCGCCCTCCTGAAGGCGTCTACCATTGAGGGCCGGGGCGGTTCATCGGTTCATCGGGCCGGGCCTCCCACCTCCGCAGGCCTGCAGGTGGAATTCATCAACCCCATCTTCGAGTTCTCGCGGGCCATGAGGCGCCTGGGCCTGGACGATGCTGAGTACGCCCTCCTCATCGCCATCAACATCTTCTCGGCCGACCGGCCCAACGTGCAGGAGCCGAGCCGAGTCGAGGCGCTGCAGCAGCCCTACGTGGACGCGCTGCTGTCCTACACCCGCATCAAGAGGCCACAGGACCAGCTGCGTTTCCCCCGCATGCTGATGAAGCTCGTGAGCCTGCGCACGCTCAGCTCCGTGCACTCGGAGCAGGTCTTCGCCCTGCGGCTCCAGGACAAGAAGCTGCCGCCTTTGCTATCGGAGATCTGGGACGTCCACGAATGA

Related Sequences

bmy_14007T0 SequenceType object (3)

Length: 521 aa      View alignments
>bmy_14007T0
MGPELFRQPSVELSGSDARWGCRKKWRTRAAPGCFQGNGSRGPPREAAHETLARSHEPRPPLVFGEGRDLERGVGAEYDGRRLLRDPTMSTPATSSLDTPLPGNGPSTPSSSPDGKEDGSEPCPGADPDVPGTNGANSASVVVILDTAEEPERKRKKGPAPKMLGDELCQVCGDTASGFHYNVLSCEGCKGFFRRSVIRGGAGRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSKEQIRKKKIRKQQQQSSPTGLGVGSSSASGPGASPGGSDGGGQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEGRGGSSVHRAGPPTSAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPSRVEALQQPYVDALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE*