Sequence detailsbmy_14016 (Coding sequence)

Part of scaffold_947 (SequenceType object (1))

For more information consult the page for scaffold_947 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHANK1ENSTTRG00000012893 (Bottlenosed dolphin)

Gene Details

SH3 and multiple ankyrin repeat domains 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012237, Bottlenosed dolphin)

Protein Percentage 79.36%
cDNA percentage 79.34%
Ka/Ks Ratio 0.14276 (Ka = 0.011, Ks = 0.0769)

SHANK1ENSBTAG00000013107 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000046968, Cow)

Protein Percentage 93.58%
cDNA percentage 91.13%
Ka/Ks Ratio 0.07117 (Ka = 0.0197, Ks = 0.2763)

SHANK1 (Minke Whale)

Gene Details

SH3 and multiple ankyrin repeat domains 1

External Links

Gene match (Identifier: BACU008279, Minke Whale)

Protein Percentage 95.44%
cDNA percentage 96.14%
Ka/Ks Ratio 0.42561 (Ka = 0.0301, Ks = 0.0706)

Genome Location

Sequence SequenceType object (2)

Length: 6531 bp    Location:416126..372896   Strand:-
Raw sequence 
>bmy_14016
ATGATGACCCACAGCCCCGCGTCAAGCGAGGACGAGGAACGCCACAGTGCCAGCGAGTGTCCCGAGGGGGGCTCAGAATCCGACAGCTCCCCAGACGGGCCAGGGAGAGGCCCCCGGGGGACCCGGGGCCGGGGCAGCGGGGGACCTGGTAGCCTGGCCTCGGTTCGAGGCCTCCAGGGCCGCTCCATGTCTGTCCCAGACGACGCCCACTTCAGCATGATGGTCTTTAGGATTGGCATCCCTGACCTGCACCAAACAAAATGCCTGCGCTTCAACCCAGATGCCACCATCTGGACAGCCAAGCAGCAGGTGCTCTGTGCCCTGAGCGAGAGCCTGCAGGATGTCCTCAACTACGGCCTGTTCCAGCCGGCCACCTCGGGCCGCGACGCCAACTTCCTGGAGGAGGAGCGACTGCTGCGGGAGTACCCCCAGTCCTTCGAGAAGGGGGTGCCCTACCTGGAGTTCCGATACAAGACCCGAGTTTACAAACAGACCAACCTGGATGAGAAGCAGCTGGCCAAGTTGCACACGAAGACGGGGTTGAAGAAGTTCCTGGAGTACGTGCAGCTCGGGACATCCGATAAGGTGGCACGGCTGCTGGACAAGGGGCTGGACCCCAATTATCATGACTCGGATTCAGGAGAGACCCCCCTGACGCTGGCTGCCCAGACAGAAGGCTCTGTAGAGGTGATTCGAACCCTGTGCCTGGGCGGGGCCCACATCGACTTCCGGGCCCGGGATGGCATGACAGCGCTACACAAGGCCGCGTGTGCCCGTCACTGCCTCGCTCTCACGGCGCTCCTGGATCTTGGGGGTTCCCCCAACTACAAGGACCGCCGGGGGCTGACTCCTCTGTTCCATACGGCTATGGTGGGGGGCGACCCCCGCTGCTGTGAGCTGCTTCTGTACAGCAGGGCCCAGCTGGGCATAGCTGATGAGAACGGCTGGCAGGAGATCCACCAGGCCTGCCAGAGGGGCCATTCTCAGCACCTGGAACACCTGCTCTTCTATGGGGCTGAGCCTGGAGCCCAGAACGCCTCGGGGAACACGGCCCTGCACATCTGCGCCCTCTACAATAAGGAGACGTGTGCTAGGATCCTCCTCTATCGAGGGGCCAACAAGGACGTGAAGAATAACAGCGGACAGACCGCCTTCCAGGTCTGGGGCTGTCGGGGCTGGTTGGGAGGGGGCATGAAGAACACAGAGTGGGTGGCAGTGATTGCTGGGAATTTTGAACTTGGGGAGCTGATCCGAAACCATCGAGAACAGGACGTGGTGCCCTTCCAGGAGTCCCCCAAGTACGCAGCCCGGCGACGGGGACCCCCCGGCGTGGGGCTGACGGTGCCCCCCGCGCTGCTGCGGGCCAACAGTGATACCAGCATGGCCCTGCCTGATTGGATGGTGTTCGCCGCCCCGGGGACCTCGTCCACCGGGGCCCCCGGCCCTACCTCAGGGCCCCAGGGCCAGTCGCAGCCCTCGGCCCCCAGCACCAAGCTCAGCAGTGGGACCCTCCGAAGTGCCAGCAGCCCCCGGGGCGCCCGGGCCCGCTCCCCATCSCGAGGGAGGCACCCCGAGGAGGCGAAGAGGCAGCCCCGTGGACGGCCCAGCTCCAGCGGGACACCCCGGGAAGGGCCAGCTGGGGGCACAGGGGGCTCCGGGGGCCCCGGGGGCTCCCTGGGCAGCCGCGGGAGACGCCGGAAGCTCTACTCAGCGGTCCCCGGACGCTCCTTCATGGCTGTGAAGTCCTACCAGGCCCAAGCCGAGGGGGAGATCTCCCTGAGCAAGGGCGAGAAGATCAAAGTGCTTAGCATCGGGGAAGGAGGCTTCTGGGAAGGCCAGGTCAAAGGTCGCATCGGCTGGTTCCCCTCTGACTGCCTGGAAGAGGTGGCCAACCGCTCCCAGGAGGCAAAGCAAGAAAGCCGAAGTGACAAGGCAAAGAGACTCTTCCGGCATTATACCGTGGGCTCCTACGACAGCTTTGATGCCCCAAGTGATTACATCATCAAGGAGAAGACAGTTCTGCTGCAGAAGAAGGACAGTGAGGGGTTTGGGTTCGTGCTCCGGGGGGCCAAGGCGCAGACCCCCATCGAGGAGTTCACCCCCACCCCGGCCTTCCCGGCGCTGCAGTATCTGGAGTCGGTGGATGAGGGTGGCGTGGCATGGCGAGCCGGACTGCGAATGGGAGACTTCCTCATTGAGGTGAACGGGCAGAATGTGGTGAAGGTCGGCCACCGGCAGGTGGTGAACATGATCCGCCAAGGGGGCAACACGCTGATGGTCAAGGTGGTGATGGTCACCCGGCACCCGGACATGGATGAGGCTCTTCATAAGAAAGCACCGCCGCAGGCTAAGCGGCTCCCGCCCCCAACAATCTCCCTGCGTTCCAAGTCTATGACCTCAGAGCTGGAGGAGATGGAGTACGAGCAGCAAGCTGCGCCGGTGCCCAGCATGGAGAAAAAGCGGACCGTGTATCAGATGGCTCTCAACAAACTGGATGAAATTTTGGCGGCAGCTCAGCAGACCATCAGTGCAAGTGAGAGTCCTGGGCCTGGTGGCCTYGCGTCCCTGGGCAAACACCGACCCAAAGGCTTCTTTGCCACTGAGTCGAGCTTTGATCCCCACCACCGCTCCCAGCCAAGTTATGAACGTCCTTCCTACCTGCCTCCAGGACCTGGGCTCATGCTCCGGCAAAAGTCTATTGGGGCTACAGAAGATGAGAGACCCTACCTAGCACCCCCAGCCATGAAGTTCAGCCGCAGCCTGTCTGTGCCTGGTTCGGAGGACATCCCGCCGCCGCCCACCACGTCCCCACCAGAGCCCCCCTACAGCACACCTCCAGCCCCCTCTTCCTCCGGCCGCCTCACTCCCTCTCCCCGGGGAGCGCCCTTCAACCCCGGCTCAGGTGGCCCCCACCCCGCCTCGTCGCCGTCGTCCTTCGATGGGCCCTGCCCTCCTGACACCCGTGTAGGGAGCCGTGAGAAGAGCTTGTACCACGGCGGGGCCCTGCCCCCTGCGCACCACCCGCCGCCCCCCCACCTGCCGCACGCTCCGCCCCCCCAGCCACACCACCACCACGCCCACCCGCCGCATCCCCCGGAGATGGAGACAGGCGGCTCCCCCGATGACCCCCCTCCCCGACTGGCTCTGGGGCCCCAGCCCAGCCTGCGAGGCTGGCGGGGCGGCGGGCCCAGCGCGACCCCGGGGGCCCTGTCCCCGTCGCACCACGGCAGCGGGGGCGGGGTTAGCGGCTCCTCCCAGGCCCCGGCCCTGCGCTACTTCCAGCTGCCTCCCCGGGCGGCCAGCGCGGCCATGTACGTGCCGGCCCGTTCGGGCCGCGGGCGCAAGGGCCCGCTCGTCAAGCAGACCAAAGTCGAAGGCGAGCCCCAGAAGGGCGGCGGCCTCCCGCCCACGCCCTCGCCCACGTCTCCGGCGTCCCCGCAGCCGCCGCCGGCCGCGGCCGCCCCGTCGGAAAAGAACTCCATCCCCATCCCCACCATCATCATCAAGGCTCCATCCACCAGTAGCAGCGGCCGCAGCAGCCAGGGCAGCAGCACCGAGGCGGAGCCCCCGACCCAGCCCGAGACCGCGGGCGGCGGAGGGGGCGGCGGCGGCGGCGGCGCCTCCGCGCCGAGCCCCGCCCCGGCCATGTCGCCAGTGCCACCGCCCCCCTCGCCCGTGCCCGCCCCCGCCTCGCCCAGCGGCCCGGCCACCCTCGATTTCACCAGCCAGTTCGGAGCGGCCCTGGTCGGGGCGGCTCGGAGAGAAGGGGGCTGGCAGAACGAAGCCCGCCGGCGGTCTACGCTCTTCCTCTCCACCGACACGGGAGACGAGGATGGCGGCGAGAGCTCGCTGGGCCCGGGGGCGCCCCCGGGCCCCCGGCTGCGCCACTCCAAATCCATCGATGAAGGCATGTTTTCGGCCGAGCCCTACCTCCGGCTGGAGTCCGCAGGCGCCGGGAGTGGCGGCGGCTACGGGGGCTACGGAGCCGGCAGCCGAGCCTACGGAAGCAGCGGAGGCAGCAGCGCCTTCACCAGCTTCCTGCCGCCGCGGCCCCTGGTCCACCCGCTGACCGGCAAGGCCCTGGACCCAGCCTCCCCGCTCGGGCTGGCCCTGGCCGCCCGAGAGCGGGCGCTGAAGGAGTCCGCGGAGGGCGCTGGGGCCCCCCAGCCCCCTCCGAGGCCCCCGTCGCCCCGCTACGAGGCTCCGCCGCCCACGCCGCACCACCACTCGCCCCACGCCCACCACGAGCCAGTGCTGCGTCTCTGGGGAGCCCCGCCGCCGGACCCGGCCCGCCGGGAGCTGGGCTACCGGGCCGGGCTGGGCAGCCAGGAGAAGTCCCTTCCGGCCAGCCCGCCAGCTGCCCGACGCTCCCTGCTGCACCGCCTGCCCCCCACCGCCCCCGGGGTCGGGCCCCTCCTGCTGCAGCTGGGGTCCGAGCCCCCCGCCCCGCACCCCGGGGTGAGCAAGGCCTGGAGGTCCGCGGCCCCGGAGGAGCCCGAGCGGCTGCCCCTCCACGTGCGGTTCCTCGAGAACTGCCAGCCTCGGGCCAGTGGGGCGGGGGGAAGGGGCCCCCCCTCGGAGGACGGGCCGGGGATCCCACCGCCCAGCCCACGCCGGTCCGTGCCCGCCTCGCCGACCTCCCCGCGGGGCAGTGACGAGAACGGGCTCCCCCTGCTGGTCCTGCCGCCCCCCGCCCCCTCGGTGGACGTGGAAGACGGTGAATTTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGGCCGCCGCCCCTCCCACGCTGGACTCCACCGCATCCAGCCTGACTTCCTATGACAGCGAGGTGGCCACGCTGACCCAGGCGGGCCCCGCAGCTGCTGGGGACGCGCCTCCGCCGGGCCCAGCAGCCCCAGCCGCCCCGCCTGCCCCTGCCCCACAGCCTGGTCCGGACCCTCCAGCTGGCACAGATTCTGGTATCGAGGAGGTGGACAGCCGGAGCAGCAGCGACCACCCGCTGGAGACCATCAGCAGCGCGTCCACGCTGAGCAGCCTGTCTGCCGAAGGCGGGGCTGGGGGCGGGGTGGCCAGTGTGGCCAGTGGGCCGGAGCTTCTGGACACGTATGTGGCCTACCTGGACGGCCAGGCCTTCGGGGGCAGCGGTCCTCCTGGCCCACCATACCCACCGCAGCTCATGACTCCCTCTAAGCTCCGGGGCCGGGCGCTTGGGGCCAGTGGAGGCCTGCGGCCTGGCCCCGGTGGGGGACTCCGAGACCCTGTCACTCCCACCAGCCCCACCGTCTCGGTGACGGGGGCTGGAACCGATGGGCTGCTGGCCCTGAGTGCTTGCTCAGGACCTTCGACGGCAGGTGTGGCCGGCGGTCCAGGGGCTGTAGAGCCAGAAGGCCCACCGGTGCCCTTGCCATCCGCCTCCTCCCTGCCTCGGAAGCTGCTGCCCTGGGAGGAGGGCCCGGGTCCACCGCCACCACCCCTGCCTGGGCCCTTAGCCCAGCCTCAGGCCTCAGCCTTGGCCACAGTAAAAGCCAGCATCATCAGTGAACTCAGCTCCAAGCTTCAGCAGTTTGGGGGCTCCTCGGCAGCTGGTGGCGCTCTGCCCTGGGCCCGGGGAGGCGGCGGGGGAAGCGGGGACGGCCACCACGGGGGAGCCAGCTACGTCCCCGAGAGGACTTCCTCCCTGCAGCGGCAGAGACTCTCTGAAGACTCCCAGTCCTCGCTTCTCTCCAAACCTGTCAGCAGCCTGTTTCAGAACTGGTCCAAACCACCTCTGCCGCCACTCCCCACAGGAACCGGGGTGTCCGCTTCAGCCGCTGCAGCCCCGGGGGCCACCTCGCCGTCGGCCTCCTCCTCCTCCACGTCCGCCCGCCACCTCCAGGGCGTGGAGTTCGAGATGCGGCCACCTTTGCTCCGCCGGGCCCCTAGCCCGTCACTGCTGCCCGCCTCGGAGCACAAGGTCAGCCCTGCACCCCGGCCCTCCTCCCTGCCCATCCTGCCTTCTGGACCCCTCTACCCGGGCCTCTTTGACATCCGCGGCTCCCCCACCGGAGGGGCAGGAGGCTCGGCTGACCCCTTCGCCCCTGTCTTCGTGCCACCGCACCCCGGGATATCCGGGGGGCTCGGTGGGGCCTTGTCAGGGGCCTCCCGCTCCCTCTCACCGACCCGCCTGCTTTCCCTGCCCCCGGACAAGCCGTTCAGCGCTAAACCTCTGGGGTTCTGGACCAAGTTCGACGTGGCTGATTGGCTTGAGTGGCTGGGCTTGGCTGAGCACCGAGCCCGGTTCCTGGACCACGAGATCGATGGCTCCCACCTGCCCGCCTTGACCAAGGAGGACTACGTCGATCTGGGGGTGACCAGGGTGGGCCACCGCATGAACATCGACCGGGCTCTCAAATTTTTCCTGGAGAGGTGA

Related Sequences

bmy_14016T0 SequenceType object (3)

Length: 2177 aa      View alignments
>bmy_14016T0
MMTHSPASSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGGPGSLASVRGLQGRSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLFQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHIDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLLYSRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKETCARILLYRGANKDVKNNSGQTAFQVWGCRGWLGGGMKNTEWVAVIAGNFELGELIRNHREQDVVPFQESPKYAARRRGPPGVGLTVPPALLRANSDTSMALPDWMVFAAPGTSSTGAPGPTSGPQGQSQPSAPSTKLSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRIGWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEALHKKAPPQAKRLPPPTISLRSKSMTSELEEMEYEQQAAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGATEDERPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGAPFNPGSGGPHPASSPSSFDGPCPPDTRVGSREKSLYHGGALPPAHHPPPPHLPHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSATPGALSPSHHGSGGGVSGSSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPTPSPTSPASPQPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPETAGGGGGGGGGGASAPSPAPAMSPVPPPPSPVPAPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFLSTDTGDEDGGESSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGSGGGYGGYGAGSRAYGSSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESAEGAGAPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGAPPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGSEPPAPHPGVSKAWRSAAPEEPERLPLHVRFLENCQPRASGAGGRGPPSEDGPGIPPPSPRRSVPASPTSPRGSDENGLPLLVLPPPAPSVDVEDGEFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAPPTLDSTASSLTSYDSEVATLTQAGPAAAGDAPPPGPAAPAAPPAPAPQPGPDPPAGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGAGGGVASVASGPELLDTYVAYLDGQAFGGSGPPGPPYPPQLMTPSKLRGRALGASGGLRPGPGGGLRDPVTPTSPTVSVTGAGTDGLLALSACSGPSTAGVAGGPGAVEPEGPPVPLPSASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGGGGSGDGHHGGASYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWSKPPLPPLPTGTGVSASAAAAPGATSPSASSSSTSARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFSAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER*