Part of scaffold_929 (Scaffold)

For more information consult the page for scaffold_929 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHD2 ENSTTRG00000000430 (Bottlenosed dolphin)

Gene Details

chromodomain helicase DNA binding protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000403, Bottlenosed dolphin)

Protein Percentage 83.75%
cDNA percentage 84.25%
Ka/Ks Ratio 0.50402 (Ka = 0.0556, Ks = 0.1103)

BT.89866 ENSBTAG00000017776 (Cow)

Gene Details

chromodomain helicase DNA binding protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054394, Cow)

Protein Percentage 88.91%
cDNA percentage 88.37%
Ka/Ks Ratio 0.27076 (Ka = 0.083, Ks = 0.3065)

CHD2  (Minke Whale)

Gene Details

chromodomain helicase DNA binding protein 2

External Links

Gene match (Identifier: BACU000533, Minke Whale)

Protein Percentage 89.64%
cDNA percentage 91.47%
Ka/Ks Ratio 0.61519 (Ka = 0.0769, Ks = 0.1251)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5553 bp    Location:157701..258300   Strand:+
>bmy_14069
TTAAGTCATTCGGCATCTGAAGAAGCTTCGGGTTCAGACTCAGGCAGCCAGTCGGAGAGTGAGCAGGGCAGCGATCCAGGAAGTGGACATGGCAGCGAGTCAAACAGTAGTTCTGAATCTTCGGAGAGTCAGTCAGAATCTGAAAGTGAATCGGGAGGTTCCAAATCCCAGCCAGTTCTTCCAGAAGCCAAAGAGAAGCCAGCCTCTAAGAAGGAACGGATAGCTGATGTGAAGAAGCGTAGTCATTGCTTAATGATGTGGGAAGAATATCCTGACGTTTATGGGGTTAGGCGGTCAAACCGAAGCAGACAAGAACCATCACGATTTAATATTAAGGAGGAGGCAAGTAGCGGGTCTGAGAGTGGGAGCCCAAAAAGAAGAGGCCAGAGGCAGCTGAAAAAACAAGAAAAATGGAAACGGGAACCCTCAGAAGATGAACAGGAACAAGGCACCAGTGCAGAGAGCGAACCAGAGCAAAAAAAAGTGAAAGCCAGAAGACCTGTCCCCAGAAGAGCAATGCCCAAACCTCGTGTTAAAAAGCAACCTAAGACTCAGCGTGGAAAGAGGAAAAAGCAAGATTCTTCTGATGATGAGGATGAAGATGATGAAGCTCCCAAAAGGCAGACTCGCCGCAGAGCGGCTAAAAATGTTAGTTATAAAGAAGATGATGACTTTGAGACTGACTCAGATGACCTCATTGAAATGACTGGAGAAGGAGTTGATGAACAGCAGGATAACAGTGAAACTATTGAAAAGGTCTTAGATTCAAGGCTGGGAAAGAAAGGAGCCACTGGAGCTTCTACTACTGTATATGCAGTTGAAGCTAACGGAGACCCTAGTGGCGACTTTGAACCTGAAAAGGATGAAGGCGAAGTCCAGTACCTCATCAAGTGGAAGGGCTGGTCGTATATCCATAGCACGTGGGAGAGTGAAGAGTCCTTACAGCAGCAGAAAGTGAAGGGCCTAAAAAAACTAGAGAACTTCAAGAAGAAAGAGGATGAAATCAAGCAATGGTTAGGGAAAGTTACTCCTGAAGATGTGGAATATTTCAACTGCCAACAAGAGCTGGCCTCAGAGCTGAACAAACAGTATCAGATAGTAGAAAGAGTAATAGCTCACAGTCGGAAGCCGGCACCTTCCAACGAACCTGAATATCTATGCAAATGGATGGGACTGCCCTATTCAGAGTGCAGCTGGGAAGATGAAGCCTTGATTGGAAAGAAATTCCAGAGCTGCATCGACAGCTTCCATAGTCGGAACAACTCAAAAACCATCCCAACAAGAGAATGCAAGGCCCTGAAGCAGAGACCACGATTTGTGGCTTTAAAGAAACAGCCGGCATATTTAGGAGGAGAGAACCTGGAGCTCCGAGATTATCAGCTAGAAGGTCTCAACTGGCTTGCTCATTCTTGGTGCAAAAGTAACAGTGTAATCCTCGCTGATGAAATGGGCCTAGGAAAGACCATCCAGACCATATCATTCCTCTCCTACCTGTTTCACCAACACCAGCTGTATGGCCCCTTTCTTATAGTCGTCCCTTTATCCACCCTCACCTCATGGCAGAGGGAGTTTGAAATCTGGGCACCAGAGATTAACGTAGTGGTTTACATAGGTGACCTGATGAGCAGAAATACGATACGAGAATACGAATGGATTCACTGTCAGACCAAAAGGCTGAAGTTCAATGCGCTTATAACAACATATGAGATCCTCTTAAAAGATAAGACTGTGCTGGGCAGTATTAACTGGGCCTTTCTGGGAGTGGACGAAGCCCATCGGTTGAAGAATGATGACTCTTTATTGTATAAAACTCTGATTGATTTCAAGTCCAACCATAGGCTCCTGATTACGGGGACCCCTCTTCAGAATTCCCTCAAAGAGCTCTGGTCCTTGCTGCACTTTATTATGCCGGAGAAGTTTGAGTTCTGGGAAGATTTTGAGGAAGACCATGGGAAAGGGAGAGAGAATGGCTATCAGAGTCTTCATAAGGTGCTAGAGCCTTTCCTTCTCCGGAGAGTGAAAAAAGATGTGGAGAAATCCCTTCCTGCCAAAGTGGAACAGATTCTCAGGGTGGAGATGTCAGCCCTTCAGAAACAATGGATTCTGACTAGGAATTACAAGGCTCTTGCCAAAGGAACAAGAGGCAGCACATCTGGTTTCCTTAATATTGTGATGGAACTGAAAAAGTGCTGCAACCACTGTTATCTCATTAAACCTCCCGAAGAAAATGAAAGGGAAAATGGACAGGAGATTCTTCTGTCCTTGATCAGGAGCAGTGGGAAGCTGATTCTATTAGATAAACTGTTGACAAGACTTCGAGAAAGAGGGAACAGAGTCCTTATCTTCTCTCAGATGGTGAGAATGTTGGATATCCTGGCTGAGTACCTGACTATTAAGCACTATCCTTTCCAGCGTCTGGATGGTTCCATCAAGGGAGAAATCCGAAAACAGGCACTGGACCACTTCAATGCAGATGGGTCTGAGGACTTCTGTTTCCTGCTCTCGACAAGGGCTGGTGGCCTGGGAATCAATTTGGCTTCAGCGGACACAGTCGTCATCTTTGATTCTGACTGGAACCCCCAGAACGACTTGCAGGCACAAGCCCGAGCCCACAGAATTGGTCAGAAGAAGCAGGTAAATATTTACCGCTTGGTTACAAAGGGGACCGTGGAGGAAGAGATCATAGAACGGGCCAAAAAGAAGATGGTATTGGACCATCTGGTGATTCAGCGCATGGATACCACTGGCCGGACAGTTCTGGAAAACAACTCTGGAAGGTCCAATTCAAATCCTTTTAATAAAGAAGAGCTGACAGCGATTTTGAAATTTGGAGCGGAGGATCTCTTCAAAGAACTTGAAGGGGAGGAATCAGAGCCTCAGGAAATGGATATAGATGAAATTTTGCGCTTGGCTGAAACCAGAGAGAATGAAGTCTCAACAAGTGCAACAGATGAGCTTCTGTCACAATTTAAGGTTGCCAACTTCGCAACAATGGAGGATGAAGAAGAACTAGAAGAGCGTCCTCACAAGGACTGGGATGAGATCATTCCAGAGGAACAAAGGAAGAAAGTAGAGGAGGAAGAGCGGCAGAAAGAGCTGGAAGAAATTTATATGTTGCCTCGAATTCGGAGTTCCACTAAAAAGGCTCAGACAAATGACAGTGACTCTGATACTGAGTCTAAGAGGCAGGCCCAGAGATCCTCTGCCTCTGAGAGTGAGACAGATGACTCTGATGATGACAAGAAGCCCAAGCGCAGAGGGCGCCCCCGAAGTGTGCGGAAGGACCTCGTGGAGGGATTCACTGATGCCGAGATCCGGAGGTTCATCAAGGCGTATAAGAAGTTTGGTCTCCCTCTTGAACGGCTGGAGTGCATAGCACGTGATGCTGAGTTGGTAGATAAGTCTGTGGCAGATCTGAAGCGCCTAGGGGAATTGATTCACAACAGCTGTGTGTCAGCAATGCAAGAATACGAAGAACAGCTGAAAGAAAATGCCAGCGAGGGGAAAGGACCAGGGAAAAAGAGAGGCCCAACTATCAAGATATCTGGGGTTCAGGTTAATGTGAAATCTATTATCCAGCATGAAGAAGAGTTTGAGATGCTGCATAAATCTATCCCTGTAGACCCTGAAGAAAAAAAAAAATACTGCTTAACCTGTCGTGTCAAAGCTGCACATTTTGATGTTGAGTGGGGAGTAGAGGATGATTCTCGCCTATTGCTGGGAATTTATGAACACGGCTATGGAAACTGGGAGCTAATTAAAACAGATCCAGAGCTTAAGTTAACTGACAAAATCCTGCCAGTGGAGACAGATAAAAAGCCCCAGGGAAAGCAGCTGCAGACCCGAGCGGACTACTTGCTGAAGCTGCTCAGGAAGAGTCTGGAGAAGGAGGGGGCCGTGACGGGCGGGGAAGAGGCCAAATTAAAGAAGCGGAAGCCTCGAGTAAAGAAGGAAAACAAAGCACCGAGGCTGAAAGATGAGCATGGAATTGAGTTTTCATCTCCTAGACACTCAGATAATCCATCAGAAGAGGGAGAAGTAAAGGATGATGGCTTAGAAAAAAGTCCAATGAAAAAGAAACAGAAGAAGAAAGAGAACAAGGAGAACAAGGAGAAACAAATGAGTTCTAGGAAAGACAAGGAAGGGGACAAGGAAAGGAAGAAATCAAAAGATAAGAAAGAGAAGCCTAAAGGTGGTGATGCCAAATCTTCAAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATATTACAGCAGGAAGTGAACCTGTCCCCATTGGAGAGGATGAGGATGATGATCTGGACCAGGAGACATTCAGCATATGTAAGGAGAGGATGAGGCCTGTGAAAAAGGCACTGAAACAGTTGGATAAACCTGACAAGGGGCTCAGTGTACAGGAACAGCTGGAGCACACCCGGAACTGCCTGCTGAAAATCGGGGACCGGATAGCCGAGTGCCTTAAAGCTTACTCAGACCAGGAGCACATCAAACTGTGGAGGAGGAACCTATGGATTTTTGTTTCCAAGTTTACAGAATTTGATGCTCGAAAATTACATAAGTTATACAAGATGGCTCACAAGAAAAGGTCTCAAGAAGAAGAGGAGCAGAAGAAGAAAGATGATGCGATTGGTGGTAAGAAACCATTTCGACCAGAGGCCTCGGGTTCAAGCCGGGATTCCCTGATGTCTCAGTCCCACACCCCGCACAACCCTCACCCTCAGAAGCCTCATTTGCCTGCCTCTCATGGCCCACAGATGCATGGACACCCAAGAGATAACTATAATGTAGTTGTATCAGTTTACTTCCTAACCAGTTATCTACCCCATGGAGGGTTCAAGAAGAAAGAAAAGCACCATTTACTTTCTCTGGAAATAAATGACTTGGCCATCTCCATAGTACCACAGACCTTGACACCCTGTTTGAAACCTACCTTTCTATTTAGTTTGAAGCCATCTTCAGATGATCCTTTCATGTTGAATAGTCAAAAGTTTTTTACTTCTTGGTTCCCTGGCCTGCTCCACCCTGGGTCAGCAATGAATTTAAGCCGCTGGTCGACTATATATTGTTTTGATGTGAAATCTCATTTTAAGGTGGTTCTTCAATTTCAGAAGGAGAATGGTGAATTTTCTTTTGCCTTAAAATTTTGGGAAGTTTGGACTCATTACTTGTATGATAACCAGCAGCAAAAAGGCCAAGAAGGAAGAAATATAGTTGGAAGTGAAATGCAGCCAGTTCTTGGAATCATGAGATCGTTACTTCTTTTTCTGCAGATCGAGGCGACTGGCAGAGGGAAAGAAAGTTCAACTATGGTGGTGGCAATAACAATCCACCCTGGGGTGGTGACAGGCACCATCAGAAGCATCCAAGGACAGGTTGTTGGTAGGAGATGTGAGTTGTTCCCAAAGATGTCTCATCGTGAGGAAAAAGGAACTTCCTTTTGTTCACATTCAGGATTTTTAGTGCCATATGATGTAGCAAAAGGCAATGTCAGCCAGAAATTTGCACAGGTAGGAATTCTCTCACTTGTGGATGGGAGAAGCTGCCCCTGGAATCTG

Related Sequences

bmy_14069T0 Protein

Length: 1851 aa      View alignments
>bmy_14069T0
LSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSESESESGGSKSQPVLPEAKEKPASKKERIADVKKRSHCLMMWEEYPDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGTSAESEPEQKKVKARRPVPRRAMPKPRVKKQPKTQRGKRKKQDSSDDEDEDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGATGASTTVYAVEANGDPSGDFEPEKDEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVTPEDVEYFNCQQELASELNKQYQIVERVIAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHCQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLLRKSLEKEGAVTGGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLSVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQEEEEQKKKDDAIGGKKPFRPEASGSSRDSLMSQSHTPHNPHPQKPHLPASHGPQMHGHPRDNYNVVVSVYFLTSYLPHGGFKKKEKHHLLSLEINDLAISIVPQTLTPCLKPTFLFSLKPSSDDPFMLNSQKFFTSWFPGLLHPGSAMNLSRWSTIYCFDVKSHFKVVLQFQKENGEFSFALKFWEVWTHYLYDNQQQKGQEGRNIVGSEMQPVLGIMRSLLLFLQIEATGRGKESSTMVVAITIHPGVVTGTIRSIQGQVVGRRCELFPKMSHREEKGTSFCSHSGFLVPYDVAKGNVSQKFAQVGILSLVDGRSCPWNL