Sequence detailsbmy_14073 (Coding sequence)

Part of scaffold_937 (SequenceType object (1))

For more information consult the page for scaffold_937 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

XPR1ENSTTRG00000010741 (Bottlenosed dolphin)

Gene Details

xenotropic and polytropic retrovirus receptor 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010208, Bottlenosed dolphin)

Protein Percentage 94.83%
cDNA percentage 96.22%
Ka/Ks Ratio 1.84784 (Ka = 0.0379, Ks = 0.0205)

XPR1ENSBTAG00000009169 (Cow)

Gene Details

xenotropic and polytropic retrovirus receptor 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012084, Cow)

Protein Percentage 92.64%
cDNA percentage 94.3%
Ka/Ks Ratio 0.63403 (Ka = 0.0526, Ks = 0.083)

XPR1 (Minke Whale)

Gene Details

xenotropic and polytropic retrovirus receptor 1

External Links

Gene match (Identifier: BACU012836, Minke Whale)

Protein Percentage 84.88%
cDNA percentage 88.2%
Ka/Ks Ratio 0.62934 (Ka = 0.1155, Ks = 0.1835)

Additional orthologs identified in other species via the OPTIC pipeline.

XPR1 (Human)   Xpr1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1635 bp    Location:237342..462190   Strand:+
Raw sequence 
>bmy_14073
ATGTTATCGGGGCCGTCCAGAGGTCAGCAGACACTTCAGATGGGCCTGGCTGCTTCCAGGAAGGTTTTTGAAACAGTCATCCAAGAGGCTTTTAAGGATATGCTGTACTCAGCTCAGGACCAGGCACCTTCTGTGGAAGTTACAGATGAGGACACAGTAAAGAGGTATTTTGCCAAGTTTGAAGAAAAATTTTTCCAAACCTGTGAAAAAGAACTTGCCAAAATCAACACATTTTATTCAGACGTTTACCATGTAACCTTCCTTGGCCTCTACGTACTTACTTGTAAAATGAGCAAATTGATTCCCAAACCTCTGGGATTTCACATTTCTGTTTTACTTCTTATAGAAAAGCTCGCAGAGGCTCAGCGCAGGTTTGCTACACTTCAGAATGAACTTCAGTCATCACTGGATGCGCAGAAAGAAAGCACTGGTGTTACTACACTGCGACAACGCAGAAAGCCAGTCTTCCACCTGTCCCATGAGGAACGTGTCCAACATAGGAATCTTAAAGACCTTAAACTGGCCTTCAGCGAGTTCTACCTCAGTCTTATCCTGCTGCAGAACTATCAGAATCTGAATTTTACAGGGTTCCGAAAAATCCTTAAAAAGCATGACAAGATCCTGGAAACATCTCGTGGAGCAGATTGGCGAGTGGCTCATGTAGAAGTAGCCCCATTTTATACATGCAAGAAAATCAACCAGCTCATCTCTGAAACTGAGGCTGTAGTGACCAATGAACTTGAAGATGGTGACAGACAAAAAGCTATGAAGCGTTTACGTGTTCCCCCTTTGGGAGCTGCTCAGCCTGCACCAGCATGGACTACTTTTAGAGTTGGCCTATTTTGTGGAATATTCATTGTACTGAATATTACCCTTGTGCTTGCCGCTGTATTTAAACTTGAAACAGATAGAAGTATTTGGCCCTTGATAAGAATCTATCGCGGTGGCTTTCTTCTGATTGAATTCCTTTTTCTACTGGGCATCAACACGTATGGTTGGAGACAGGCTGGAGTAAATCATGTGCTCATCTTTGAACTTAATCCGAGAAGCAATTTGTCTCATCAGCATCTCTTTGAGATTGCTGGATTCCTCGGGATATTGTGGTGCCTGAGCCTTCTGGCATGCTTCTTTGCTCCAGTTAGTGTCATCCCCACATATGTGTACCCACTTGTCCTTTATGGGTTTATGGTTTTCTTTCTCATCAACCCCACCAAAACTTTCTATTATAAATCCCGGTTTTGGCTGCTTAAACTGCTGTTTCGAGTATTTACAGCCCCCTTCCATAAGGTAGGCTTTGCTGATTTCTGGCTGGCCGATCAGCTGAACAGCCTGTCAGTGATACTGATGGACCTGGAATATATGATCTGCTTCTACAGTTTTGAGCTCAAATGGGATGAAAGTGGGGGCCTGTTGCCAAATGATTCAGAAGAACCAGAAATTTGCCACAAATACTCATATGGTGTGCGGGCTGTTGTTCAGTGCATTCCTGCTTGGCTTCGCTTTATCCAGTGCCTGCGCCGATACCGAGACACAAAAAGGGCCTTTCCTCATTTAGTTAATGCTGGGAAATACTCCACGACTTTCTTCACGGTGACGTTTGCAGCCCTTTACAGCACTCACAAAGGTATTCATTGA

Related Sequences

bmy_14073T0 SequenceType object (3)

Length: 545 aa      View alignments
>bmy_14073T0
MLSGPSRGQQTLQMGLAASRKVFETVIQEAFKDMLYSAQDQAPSVEVTDEDTVKRYFAKFEEKFFQTCEKELAKINTFYSDVYHVTFLGLYVLTCKMSKLIPKPLGFHISVLLLIEKLAEAQRRFATLQNELQSSLDAQKESTGVTTLRQRRKPVFHLSHEERVQHRNLKDLKLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILETSRGADWRVAHVEVAPFYTCKKINQLISETEAVVTNELEDGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLFCGIFIVLNITLVLAAVFKLETDRSIWPLIRIYRGGFLLIEFLFLLGINTYGWRQAGVNHVLIFELNPRSNLSHQHLFEIAGFLGILWCLSLLACFFAPVSVIPTYVYPLVLYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSFELKWDESGGLLPNDSEEPEICHKYSYGVRAVVQCIPAWLRFIQCLRRYRDTKRAFPHLVNAGKYSTTFFTVTFAALYSTHKGIH*