Part of scaffold_930 (Scaffold)

For more information consult the page for scaffold_930 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RLIM ENSBTAG00000015630 (Cow)

Gene Details

E3 ubiquitin-protein ligase RLIM

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020757, Cow)

Protein Percentage 98.69%
cDNA percentage 98.03%
Ka/Ks Ratio 0.08806 (Ka = 0.0058, Ks = 0.0659)

RLIM  (Minke Whale)

Gene Details

ring finger protein, LIM domain interacting

External Links

Gene match (Identifier: BACU013000, Minke Whale)

Protein Percentage 85.95%
cDNA percentage 89.28%
Ka/Ks Ratio 0.68107 (Ka = 0.1068, Ks = 0.1569)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1902 bp    Location:368304..390658   Strand:+
>bmy_14083
ATGCTCAAGATAATTTTCCACTTGTTCATCAAGATGGAAAGCTCAGATTCTAACGATAAAGGAAGCGGTGATCAGTCTGCAGCACAGCGCAGAAGTCAGATGGACCGATTGGATCGGGAAGAAGCTTTCTATCAATTTGTAAATAACCTCAGTGAAGAAGATTATAGGCTTATGAGGGATAACAATTTGCTAGGCACCCCAGGTGAAAGTACTGAGGAAGAGTTGCTGAGAAGACTACAACAAATTAAAGAGGGCCCACCACCACAAAACTCAGATGAAAATAGAGGTGGAGACTCTTCAGATGATGTGTCTAATGGTGACTCTATAATAGACTGGCTTAACTCTGTCAGACAAACTGGAAATACGACAAGAAGTGGGCAAAGAGGAAACCAATCTTGGAGAGCAGTGAGCCGGACTAATCCAAACAGCGGTGATTTCAGATTCAGTTTAGAGATCAATGTTAACCGTAATAATGGGAGCCAAAATCCAGAGAATGAAAATGAGCTATCTGCAAGACGTTCTAGTGGAGAAAGTATGGACAACAACAGCCAAAGGCAAGTGGAAAATCCACGATCTGAATCAACATCTGCAAGGCCACCCAGATCAGAACGAAATTCAACTGAATCATTAACAGAAGCCCCACCTACCAGAGGTCAGAGAAGGGCAAGAAGTAGGAGCCCAGAYCATCGGAGAACCCGAGCAAGAGCTGAAAGAAGTAGATCACCTCTGCATCCAATGAGTGAAATTCCACGAAGATCTCATCATAGTATCTCATCTCAGACTTTTGAGCATCCTTTAGTAAATGAGACTGAGGGAAGTTCTAGAACCCGGCACCACGTGACATTGAGACAGCAAATAAGTGGACCTGACTTGCTAAGTAGAGGTCTCTTTGCAGCTTCTGGAACCAGAAATGCCTCACAAGGAGCAGGGTCTTCAGATACAACTGGCAATGGTGAATCTACAGGATCAGGCCAGAGACCTCCAACCATAGTCCTTGATCTTCAAGTAAGAAGAGTTCGTCCTGGAGAATATCGGCAGAGAGATAGCATAGCTAGCAGAACTCGGTCAAGGTCTCAGACGCCAAACAACACCGTCACTTACGAAAGTGAACGAGGAGGTTTTAGGCGTACGTTTTCACGTTCTGAGCGAGCAGGTGTGAGAACCTATGTCAGTACCATCAGAATTCCAATTCGTAGAATCTTAAATACTGGTTTAAGTGAGACTACATCTGTTGCAATTCAGACCATGTTAAGGCAGATAATGACAGGTTTTGGTGAGTTAAGCTACTTTATGTACAGTGATAGTGATTCAGAGCCTAGTGGCTCAGTCTCGAGTCGAAATATGGAAAGGTCAGAGTCACGGAATGGAAGAGGGGGTTCTGGTGGTAGTAGCAGTTCTGGTTCGAGTTCCAGTTCAAGTTCCAGTTCTAGTTCCAGTTCTAGTTCCAGTTCCAGTCCTAGTTCCAGTTCCAGTGGTGAAAGTTCAGAGACTAGCTCAGAGGTATTTGAAGGCAGTAATGAAGGAAGCTCATCATCAGGCTCATCAGGTGCCAGGCGAGAGGGTCGACACAGGGCCCCAGTAACATTTGATGAAAGTGGCTCTTTGCCCTTCCTTAGTCTGGCTCAGTTTTTCCTCTTAAATGAGGATGATGATGACCAACCTAGAGGACTCACCAAAGAACAGATTGACAACTTGGCAATGAGAAGTTTTGGTGAAAACGATGCATTAAAAACCTGTAGTGTTTGCATTACAGAATACACAGAAGGCAACAAACTTCGTAAACTACCGTGTTCCCATGAGTACCATGTCCACTGCATCGATCGCTGGTTATCTGAGAATTCTACTTGTCCTATATGTCGCAGAGCAGTCTTAGCTTCAGGTAACAGAGAAAGCGTTGTGTGA

Related Sequences

bmy_14083T0 Protein

Length: 634 aa      View alignments
>bmy_14083T0
MLKIIFHLFIKMESSDSNDKGSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGESTEEELLRRLQQIKEGPPPQNSDENRGGDSSDDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGSQNPENENELSARRSSGESMDNNSQRQVENPRSESTSARPPRSERNSTESLTEAPPTRGQRRARSRSPDHRRTRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRHHVTLRQQISGPDLLSRGLFAASGTRNASQGAGSSDTTGNGESTGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDSEPSGSVSSRNMERSESRNGRGGSGGSSSSGSSSSSSSSSSSSSSSSSSPSSSSSGESSETSSEVFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV*