Part of scaffold_956 (Scaffold)

For more information consult the page for scaffold_956 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PKNOX1 ENSTTRG00000009930 (Bottlenosed dolphin)

Gene Details

PBX/knotted 1 homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009416, Bottlenosed dolphin)

Protein Percentage 80.73%
cDNA percentage 84.4%
Ka/Ks Ratio 0.49644 (Ka = 0.1463, Ks = 0.2946)

PKNOX1 ENSBTAG00000014153 (Cow)

Gene Details

Homeobox protein PKNOX1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018809, Cow)

Protein Percentage 81.65%
cDNA percentage 82.34%
Ka/Ks Ratio 0.32313 (Ka = 0.1432, Ks = 0.443)

PKNOX1  (Minke Whale)

Gene Details

PBX/knotted 1 homeobox 1

External Links

Gene match (Identifier: BACU004388, Minke Whale)

Protein Percentage 80.73%
cDNA percentage 85.17%
Ka/Ks Ratio 0.64102 (Ka = 0.1498, Ks = 0.2338)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1410 bp    Location:159774..132306   Strand:-
>bmy_14092
ATGCTTCTCTGCTTTTGTCTTCCCAGACACCGTTTGCTTTTGACTCAAGATGATTTGATGTTTTATAAAGAACTCACTCACCATGATGGCTACACAGACGTTGAGCATAGACAGCTATCAAGATGGGCAACAATGATCACCTTCCGACACAGCCTGTTACGTGTCCGTCTCCCTCCCGCTGGTCCCTGCCCTGATGCAGGGAGTCCAGGGCAGGGCTGGGCGCAGCGGGGGAAAGGCCTCGCTTGTAACGGCTCAGCACTTCCCATGCAAGTAGTAACAGAGTTAAAAACGGAGCAAGACCCCACCTGCTCTGAACCAGATGTGGAAGGAGTGAGCCCTCCCCCTGTGGGGTCCCAGACCCCGATGGATGCAGACAAGCAGGCCATTTATAGGAAGCAAGAGAAGGAAGGAAAGCCCTTCTTTTGTGAAGATCCAGAAACTGACAATTTAATGGTAAAAGCAATCCAGGTTCTGCGTATTCATCTTCTTGAGCTGGAAAAGGTTAATGAACTCTGCAAAGATTTCTGCAGTCGCTATATTGCTTGTCTAAAGACGAAAATGAACAGTGAAACTCTCCTGAGTGGGGAACCTGGCAGCCCGTACTCCCCTGTCCAGTCCCAGCAGATTCAAAGCGCCATCACAGGCACTCTCAGCCCCCAAGGAATCGTGGTGCCAGCATCCGCTCTGCAACAGGGGAACGTCACCATGGCAACAGTGGCAGGGGGCACAGTCTATCAGCCGGTCACGGTCGTCACTCCCCAAGGCCAGGTAGTGACGCAGGCGCTGTCGCCCGGCACGATCCGGATCCAGAACTCCCAGCTTCAGTTACAGTTAAACCAGGATCTCAGCATCTTGCACCAAGATGACGGCTCATCTAAGAACAAGAGGGGGGTCCTGCCGAAGCACGCCACCAGCGTGATGAGGTCCTGGCTCTTCCAGCACATCGGGCATCCCTACCCGACAGAAGATGAGAAAAAACAGATTGCTGCTCAGACAAATTTGACACTACTCCAAGTTAACAACTGGTTCATCAACGCGAGAAGACGAATCCTGCAGCCGATGTTGGATTCTAGTTGCTCAGAAACTCCAAAAACAAAGAAGAAAACTGCTCAGAACAGACCCGTCCAGAGGTTTTGGCCTGATTCCATCGCCTCAGGAGCCGCACAGCCAGCCGCCAGCGAGCTGACCATGTCCGAAGGAGCCGTCGTGACCATCACCGCGCCTGTGAGCATGAACGTGGACAGCCTGCAGTCCCTGTCGTCGGACGGGGCCACGCTGGCGGTGCAGCAGGTGATGATGGCCGAGCAGAGCGAGGACGACTCGGTGGACAGCACGGGGGACGGCGGGGCGGCGCTGGCGCCCGGCCACCTGGGCGGGCTGGTGCTGGAGAACAGCGACTCCCTGCAGTAG

Related Sequences

bmy_14092T0 Protein

Length: 470 aa      View alignments
>bmy_14092T0
MLLCFCLPRHRLLLTQDDLMFYKELTHHDGYTDVEHRQLSRWATMITFRHSLLRVRLPPAGPCPDAGSPGQGWAQRGKGLACNGSALPMQVVTELKTEQDPTCSEPDVEGVSPPPVGSQTPMDADKQAIYRKQEKEGKPFFCEDPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGTLSPQGIVVPASALQQGNVTMATVAGGTVYQPVTVVTPQGQVVTQALSPGTIRIQNSQLQLQLNQDLSILHQDDGSSKNKRGVLPKHATSVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWPDSIASGAAQPAASELTMSEGAVVTITAPVSMNVDSLQSLSSDGATLAVQQVMMAEQSEDDSVDSTGDGGAALAPGHLGGLVLENSDSLQ*