Sequence detailsbmy_14101 (Coding sequence)

Part of scaffold_956 (SequenceType object (1))

For more information consult the page for scaffold_956 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBASH3AENSTTRG00000000733 (Bottlenosed dolphin)

Gene Details

ubiquitin associated and SH3 domain containing A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000690, Bottlenosed dolphin)

Protein Percentage 71.52%
cDNA percentage 72.68%
Ka/Ks Ratio 0.23017 (Ka = 0.0287, Ks = 0.1245)

UBASH3AENSBTAG00000023398 (Cow)

Gene Details

ubiquitin-associated and SH3 domain-containing protein A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028356, Cow)

Protein Percentage 86.28%
cDNA percentage 85.4%
Ka/Ks Ratio 0.14822 (Ka = 0.0837, Ks = 0.5648)

UBASH3A (Minke Whale)

Gene Details

ubiquitin associated and SH3 domain containing A

External Links

Gene match (Identifier: BACU004396, Minke Whale)

Protein Percentage 95.54%
cDNA percentage 96.53%
Ka/Ks Ratio 0.34019 (Ka = 0.0263, Ks = 0.0772)

Additional orthologs identified in other species via the OPTIC pipeline.

UBASH3A (Human)   Ubash3a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1818 bp    Location:618583..579801   Strand:-
Raw sequence 
>bmy_14101
ATGGCAGCGGGTGAGACTCAGATCTATGCCAAGGTTTCCAACAAGCTCAAGGGCCGCAGCACCACCTCGCTCCTGGACCCCCTCCTGAGCATGGGCTTCCCGGCACACACCGCGCTCAAGGCGTTGGCGGCCACTGGAAGGAAGACGGCGGCGGAGGCGTCAGACTGGCTGCAGTGCCATTGCAATGACCCTTCTCTCGACGACCCCATCCCCCAGGAGTACGCCCTTTTCCTCTGTCCCACGGGACCCCTGCTGGACAAACTTCAAGAGTTCTGGAGAGAGAGCAGGCGTCAGTGCGCAAAGAACAGAGCCCATGAGGTCTTCCCTCACATAACGCTCTGTGACTTCTTCACGTGCGAGGACCAGAAGGTGGAGTGTCTGTATGAAGCACTGAAGAGAGCCGGGGATAGGACCCTGGGCGCCTTCCCCTCGGCTGTGCCTCTGGTTCTCCATTCTTCCGTCAGCTACCTGGGCTTCTTCGTGAACGACAGCCCCGCAGACATCATCCAGGAATTTGCTGTGATGTTCGCCACGGAAGCTTCCATCTTAGCAGACTGCACCGTGAAGCCCTGCACCAAGCAGCTGCATCTCACCCTGGCCCACAAGTTCTATCCCCACCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCGTCCACCCCGGCCACGGCTGCCAGTGGATGGCCGCACTGTACTCCCGGGACATGCGCTTTGTACACTACCAGACCCTGAGGGTCCGGTTCCAGTACAAACCCCAGAACATGGATGAGCTCACACTCAGTCCCGGTGACTACATCTTCGTGGACCCCACTCAGCAGGAGGAAGCCAGCGAGGGCTGGGTGATTGGGATCTCACAGCAGACCGGCTGCCGGGGCTTCCTGCCCGAGAACTACACGGAACGAGCTAGCGAGTGTGACACCTGGGTGAAGCACAGGACGTACACCTTCAGTGTAGCCCCCGACCTGAGCTCCGGGAAGGACGGTGAAGCCAGCAGCAGACGGAACGGGGAGCCTCAGCCTCCACCCATGTCCCGGAGCATCAGTAGCCTGCAGTCCCTACAGGCCACCATAATGAGGAAAAGTGTCCTGGTGGTGCGCCATGGGGAGAGAGTGGACCAAATCTTCGGGAAGTCCTGGCTGCAGCAATGTTCCACTTCCGACGGGAAATACTACCGGCCAGACCTGAACTTCCCTCGTAGTCTGCCCAGACGGAGCCGCGGTATCAAAGACTTTGAAAACGATCCACCTTTATCGTCCTGTGGAATTTTCCAGTCCAGAATGGCAGGGGAAGCTCTGCTGGACAGTGGCATCAGGATCACCTCCGTCTTCACCTCCCCAGCCCTCCGCTGTGTGCAGACAGCCAAACACATCCTGGAAGAGCTCAAACTGGAGAAGAAAATTAAGATAAGAGTGGAGCCCGGAATCTTTGAATGGACCAAATGGGAGGCTGGCAAAACCACCCCGACCCTCATGACCCTGGAAGAGCTGAGAGAGGCGGATTTCCACGCCCGCCTTCCCCCTTCCCTCCCTCCTGCCTGCCGAGCGCTACGAGGATTACTTGCACAGGTGTGCGTGGGCGTCATCCTGGTCGTGGGCCATGGCTCGGCGCTGGACTCCTGCACGCGCCCACTCCTTGGGCTGCCGCCCCGGGACTGCACAGACTTCACCCAGCTAGTGAGAAAGATCCCTTCTCTGGGTATGTGCTTCTGCGAAGAAAACAAAGAGGAAGGAAAATGGGAGTTGGTGAACCCTCCCGTGAAGACGCTGACTCATGGCTCAAACTCAGCGTTTAACTGGAGTAACTGGATCCCGGGCAACTAA

Related Sequences

bmy_14101T0 SequenceType object (3)

Length: 606 aa      View alignments
>bmy_14101T0
MAAGETQIYAKVSNKLKGRSTTSLLDPLLSMGFPAHTALKALAATGRKTAAEASDWLQCHCNDPSLDDPIPQEYALFLCPTGPLLDKLQEFWRESRRQCAKNRAHEVFPHITLCDFFTCEDQKVECLYEALKRAGDRTLGAFPSAVPLVLHSSVSYLGFFVNDSPADIIQEFAVMFATEASILADCTVKPCTKQLHLTLAHKFYPHHQRTLEQLARAVHPGHGCQWMAALYSRDMRFVHYQTLRVRFQYKPQNMDELTLSPGDYIFVDPTQQEEASEGWVIGISQQTGCRGFLPENYTERASECDTWVKHRTYTFSVAPDLSSGKDGEASSRRNGEPQPPPMSRSISSLQSLQATIMRKSVLVVRHGERVDQIFGKSWLQQCSTSDGKYYRPDLNFPRSLPRRSRGIKDFENDPPLSSCGIFQSRMAGEALLDSGIRITSVFTSPALRCVQTAKHILEELKLEKKIKIRVEPGIFEWTKWEAGKTTPTLMTLEELREADFHARLPPSLPPACRALRGLLAQVCVGVILVVGHGSALDSCTRPLLGLPPRDCTDFTQLVRKIPSLGMCFCEENKEEGKWELVNPPVKTLTHGSNSAFNWSNWIPGN*