Sequence detailsbmy_14117 (Coding sequence)

Part of scaffold_935 (SequenceType object (1))

For more information consult the page for scaffold_935 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CALUENSTTRG00000014604 (Bottlenosed dolphin)

Gene Details

calumenin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013846, Bottlenosed dolphin)

Protein Percentage 79.37%
cDNA percentage 78.94%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.045)

BT.87360ENSBTAG00000016481 (Cow)

Gene Details

calumenin precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021909, Cow)

Protein Percentage 92.7%
cDNA percentage 89.84%
Ka/Ks Ratio 0.10896 (Ka = 0.0463, Ks = 0.4249)

Additional orthologs identified in other species via the OPTIC pipeline.

CALU (Human)   Calu (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1224 bp    Location:640473..668775   Strand:+
Raw sequence 
>bmy_14117
ATGGCTGTCCGGAGAAGCTGTGCGTCCGCGGCGGGTTTGTTGGTGATTGGTCCGGAGGCTGCCGGCGTGGAGGACAGCGGCGGGGCGCGGAACCGCTTCCGGTTGGGCGGTGCTTGCGCGCCAGAGCTGAGCCGGTGGGTGAGCTGTGACCGCGGCATCCTGGGCAGTGGGCGCAACGGTGAGAGGGCCTCCTTGTCTCAGGGCCTCTGTTTCTGCCAGCTCGGGGTTCCGAGGCCTGAGGCTGCTCGCGACTGCCCGACCCTCGATCTGATTATCATGGACCTGCGACAGTTCCTTACATGCCTGTCCCTGTGCACAGCCTTTGCCTTGAGCAAGCCCACGGAAAAGAAGGACCGTGTACACCATGAGCCTCAGCTCAGTGACAAAGTTCACAATGATGCTCAGAGTTTTGATTATGACCATGATGCCTTCTTGGGTGCTGAAGAAGCAAAAACCTTTGATCAGCTGACACCAGAAGAGAGCAAGGAAAGACTTGGAAAGATTGTAAGTAAAATAGATGGCGACAAGGACGGGTTTGTCACTGTGGATGAGCTCAAAGACTGGATTAAATTTGCACAAAAGCGCTGGATTTACGAGGATGTAGAGCGACAGTGGAAGGGGCATGACCTCAATGAGGACGGCCTCGTTTCCTGGGAAGAGTATAAAAATGCCACCTACGGCTACGTTTTAGATGATCCAGACCCTGATGATGGATTTAACTATAAACAGATGATGGTTAGAGATGAGCGGAGGTTTAAAATGGCAGACAAGGATGGAGACCTCATTGCCACAAAGGAGGAATTCACAGCTTTCCTGCACCCTGAGGAGTATGACTACATGAAGGATATAGTAGTACAGGAAACAATGGAAGATATAGATAAGAATGCTGATGGTTTCATTGATCTGGAGGAGTATATTGGTGACATGTACAGCCATGATGGAAATGCTGATGAGCCAGAATGGGTAAAGACAGAGAGAGAACAATTTGTTGAGTTTCGAGATAAGAACCGTGATGGGAAGATGGATAAGGAAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCATGCAGAGGCAGAAGCCAGGCACCTAGTCTATGAATCCGACCAAAACAAGGATGGCAAGCTTACCAAGGAGGAGATTGTTGACAAGTATGATTTATTTGTGGGCAGCCAGGCCACAGATTTTGGTGAGGCCTTAGTACGACATGACGAGTTCTGA

Related Sequences

bmy_14117T0 SequenceType object (3)

Length: 408 aa      View alignments
>bmy_14117T0
MAVRRSCASAAGLLVIGPEAAGVEDSGGARNRFRLGGACAPELSRWVSCDRGILGSGRNGERASLSQGLCFCQLGVPRPEAARDCPTLDLIIMDLRQFLTCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNADEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF*