Part of scaffold_941 (Scaffold)

For more information consult the page for scaffold_941 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSHR ENSTTRG00000000764 (Bottlenosed dolphin)

Gene Details

thyroid stimulating hormone receptor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000721, Bottlenosed dolphin)

Protein Percentage 91.65%
cDNA percentage 93.41%
Ka/Ks Ratio 0.47737 (Ka = 0.0568, Ks = 0.119)

TSHR ENSBTAG00000017489 (Cow)

Gene Details

thyrotropin receptor precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052860, Cow)

Protein Percentage 87.3%
cDNA percentage 87.3%
Ka/Ks Ratio 0.21109 (Ka = 0.0823, Ks = 0.39)

TSHR  (Minke Whale)

Gene Details

thyroid stimulating hormone receptor

External Links

Gene match (Identifier: BACU013135, Minke Whale)

Protein Percentage 91.47%
cDNA percentage 93.53%
Ka/Ks Ratio 0.52385 (Ka = 0.0577, Ks = 0.1101)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1656 bp    Location:20354..15070   Strand:-
>bmy_14144
ATGAATACACACAATCAGTGTATCCAACAGACAGCAAAGCAGAAAAAAGGAGCCAAGAGACGCTCTCTTGTTTCACTGACAGAAAAGAGACACGCTGTTATTCAACGCAAGGATGTCTCTCATACCAGTGTTACTGCCCTGCCATCCAAAGGCCTGGAACACCTGAAGGAATTGATAGCAAGAAACACTTGGACTCTAAAGAAACTTCCACTTTCCTTGAGTTTCCTTCATCTCACACGGGCTGACCTTTCTTATCCGAGCCACTGCTGTGCTTTTAAGAATCAGAAGAAAATCAGAGGTATCTGCGGGTTGACTTCCTGCACTCAGACTAGCAAATATGAAGAGGATCTGGGTGACGGCAGCGCTGCGTACAAGGAAAACTCCAAGTTCCAGGATACCCACAGCAACTCTCATTATTACGTCTTCTTAGAAGAACAAGAGGATGAGATCATTGGTTTTGGCCAAGAGCTCAAAAACCCCCAGGAAGAGACCCTACAGGCCTTTGACAGCCATTATGACTACACTGTGTGTGGGGGCAGTGAAGACATGGTGTGTACCCCCAGGTCGGATGAGTTCAACCCCTGTGAAGACATAATGGGCTACAAATTCCTGAGAATCGTGGTGTGGTTTGTTAGTCTGCTGGCTCTCCTGGGCAATGTCTTTGTCCTGGTCATCCTCCTCACGAGCCACTACAAACTGACGGTCCCACGCTTTCTCATGTGCAACTTGGCCTTCGCGGATTTCTGCATGGGGATGTACCTGCTCCTCATAGCCTCCGTAGACCTCTACACTCAGTCTGAGTACTACAACCACGCCATCGACTGGCAGACAGGCCCTGGGTGCAACACAGCTGGTTTCTTCACCGTCTTTGCCAGCGAATTGTCAGTGTACACACTGACGGTCATCACCCTGGAGCGCTGGTACGCCATCACCTTCGCCATGCGCCTGGACCGCAAGATCCGCCTCAGGCACGCCTACGCCATCATGGTTGGGGGCTGGGTTTGCTGCTTCCTGCTCGCCCTGCTCCCTTTGGTGGGAATAAGCAGCTACGCTAAGGTCAGTATCTGCCTGCCCATGGACACCGAGACGCCTCTTGCCCTGGCATATATTTTCCTTGTTCTGTTGCTCAACATAGTTGCCTTTATCATCGTCTGCTCCTGTTACGTGAAGATCTACATCACAGTCCGGAATCCCCAGTACAACCCGGGGGACAAAGACACCAAAATTGCCAAAAGGATGGCTGTGTTGATCTTCACTGACTTCATGTGCATGGCCCCAATCTCATTCTATGCTCTGTCAGCACTTATGAACAAGCCTCTCATCACCGTTACCAACTCCAAAATCTTGCTGGTTCTCTTCTACCCACTTAACTCCTGTGCCAATCCATTCCTCTATGCCATTTTCACCAAAGCCTTCCAGAGGGATGTGTTTATCCTGCTCAGCAAGTTTGGTATCTGTAAACGTCAGGCTCAGGCATACCGGGGTCAGAGAATTTCTGCAAAGAACAGCACCGGTATTCAGGTCCAAAAGGTTACCCAAGACATGAGGCAAAGTCTCCCCAACATGCAGGACAACTATGAACTGCTTGAAAACTCCCATCTAACCCCRAATAAGCAGGACCAAATCCCAAAAGAGTATAAGCAAACAGTTTTGTAA

Related Sequences

bmy_14144T0 Protein

Length: 552 aa      View alignments
>bmy_14144T0
MNTHNQCIQQTAKQKKGAKRRSLVSLTEKRHAVIQRKDVSHTSVTALPSKGLEHLKELIARNTWTLKKLPLSLSFLHLTRADLSYPSHCCAFKNQKKIRGICGLTSCTQTSKYEEDLGDGSAAYKENSKFQDTHSNSHYYVFLEEQEDEIIGFGQELKNPQEETLQAFDSHYDYTVCGGSEDMVCTPRSDEFNPCEDIMGYKFLRIVVWFVSLLALLGNVFVLVILLTSHYKLTVPRFLMCNLAFADFCMGMYLLLIASVDLYTQSEYYNHAIDWQTGPGCNTAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRKIRLRHAYAIMVGGWVCCFLLALLPLVGISSYAKVSICLPMDTETPLALAYIFLVLLLNIVAFIIVCSCYVKIYITVRNPQYNPGDKDTKIAKRMAVLIFTDFMCMAPISFYALSALMNKPLITVTNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGICKRQAQAYRGQRISAKNSTGIQVQKVTQDMRQSLPNMQDNYELLENSHLTPNKQDQIPKEYKQTVL*