Sequence detailsbmy_14185 (Coding sequence)

Part of scaffold_985 (SequenceType object (1))

For more information consult the page for scaffold_985 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DICER1ENSTTRG00000013044 (Bottlenosed dolphin)

Gene Details

dicer 1, ribonuclease type III

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012381, Bottlenosed dolphin)

Protein Percentage 93.06%
cDNA percentage 92.81%
Ka/Ks Ratio 0.18784 (Ka = 0.009, Ks = 0.0481)

BT.45343ENSBTAG00000012852 (Cow)

Gene Details

endoribonuclease Dicer

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017080, Cow)

Protein Percentage 97.47%
cDNA percentage 94.08%
Ka/Ks Ratio 0.06181 (Ka = 0.0136, Ks = 0.2197)

DICER1 (Minke Whale)

Gene Details

dicer 1, ribonuclease type III

External Links

Gene match (Identifier: BACU007723, Minke Whale)

Protein Percentage 99.11%
cDNA percentage 99.0%
Ka/Ks Ratio 0.2368 (Ka = 0.0052, Ks = 0.0221)

Additional orthologs identified in other species via the OPTIC pipeline.

DICER1 (Human)   Dicer1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5757 bp    Location:259320..303788   Strand:+
Raw sequence 
>bmy_14185
ATGAGTTGTTACCTAGGGTATGAATTAATACAGACTTGGAAACTGAAAGAACTTAGAATCAGCATTTTGAGCATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCTCACCAATGGGTCCTTTCTTTGGACTGCCATGGCAACAAGAAGCAATTCATGATAACATTTATACGCCAAGAAAATATCAGGTTGAACTGCTTGAAGCAGCTCTGGATCATAATACCATAGTCTGTTTAAACACTGGCTCAGGGAAGACGTTTATTGCAGTACTACTCACTAAAGAGCTGTCCTATCAGATCAGGGGAGACTTCAACAGAAATGGCAAAAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGGTTGCTCAACAAGTGTCAGCTGTCAGAACTCACTCAGATCTCAAGGTTGGGGAATACTCAAACCTGGAAGTAAGTGCATCTTGGACAAAAGAGAAATGGAACCAAGAGTTTACTAAGCACCAGGTTCTCGTTATGACTTGCTATGTCGCCTTGAATGTTTTGAAAAATGGTTACTTATCACTATCAGACATTAACCTTTTGGTGTTTGATGAGTGTCATCTTGCAATCCTAGACCACCCCTACCGAGAAATTATGAAGCTCTGTGAAAATTGTCCATCATGTCCTCGTATTTTGGGACTAACTGCTTCCATTTTAAATGGGAAATGTGATCCAGAGGAATTGGAAGAAAAGATTCAGAAACTGGAGAAAATTCTTAAGAGTAATGCTGAAACTGCAACTGACTTGGTGGTCTTAGACAGATATACTTCTCAGCCATGTGAGATTGTGGTAGACTGTGGACCATTTACTGACAGAAGTGGGCTTTATGAAAGACTGCTGATGGAATTAGAAGAAGCACTTAATTTTATCAATGACTGTAACATATCTGTACATTCAAAAGAAAGAGATTCTACTTTAATTTCTAAACAGATACTCTCAGACTGTCGTGCGGTACTGGTAGTTCTGGGACCCTGGTGTGCGGATAAAGTCGCTGGAATGATGGTAAGAGAACTACAGAAATACATCAAACACGAGCAAGAGGAGCTGCACAGGAAATTTCTATTGTTTACAGACACTTTCCTAAGGAAAATCCATGCACTATGTGAAGAGCACTTCTCACCTGCCTCACTTGACCTGAAATTTGTAACTCCTAAAGTAATAAAACTGCTTGAAATCTTACGCAAATATAAACCGTATGAGCGACAGCAGTTTGAGAGCGTTGAGTGGTATAATAATAGGAATCAGGATAATTACGTGTCTTGGAGTGATTCTGAGGATGATGAGGAGGACGAAGAAATTGAAGAAAAAGAAAAGCCAGAGACAAATTTTCCTTCTCCATTTACCAATATCTTGTGTGGAATTATTTTTGTGGAAAGAAGATATACAGCAGTTGTCTTAAACAGATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGCTGGCTTACATCAGCAGCAATTTTATAACTGGACATGGCATTGGAAAGAATCAGCCTCGTAACAAACAGATGGAAGCAGAATTCCGAAAACAGGAAGAGGTACTTAGGAAATTTCGAGCACATGAAACCAACCTGCTTATTGCAACAAGTATTGTGGAGGAGGGTGTTGACATACCGAAATGCAACTTGGTGGTTCGTTTTGATCTGCCCACAGAGTATCGATCCTATGTTCAATCTAAGGGAAGAGCCAGGGCACCGATCTCTAATTATGTAATGTTAGCAGATACAGACAAAATAAAAAGTTTTGAAGAAGACCTTAAAACATACAAAGCTATTGAAAAGATCTTGAGAAACAAATGTTCCAAGTCAGTTGATACCAGTGAGACTGACATTGAGCCTGTTGTGGATGATGACGATGTTTTCCCACCATATGTGTTGAGGCCCGATGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGCCACATCAATAGATACTGTGCTAGATTACCAAGTGATCCGTTTACTCACCTGGCTCCTAAATGTAGAACCCGAGAGTTGCCTGATGGTACATTTTATTCAACTCTYTATCTGCCAATTAACTCACCTCTTCGAGCCTCCATTGTTGGTCCCCCAATGAGCTGTATACGATTGGCTGAAAGAGTCGTAGCTCTCATTTGCTGTGAAAAACTGCACAAAATTGGCGAACTGGATGACCATTTGATGCCAGTTGGGAAAGAGACTGTTAAATACGAAGAAGAGCTTGATTTACATGATGAAGAAGAGACAAGTGTTCCAGGAAGACCAGGCTCCACAAAACGAAGACAGTGCTACCCAAAAGCAATTCCAGAATGTTTGAGGGATAGCTACCCCAAGCCCGATCAGCCTTGTTACCTGTATGTGATAGGAATGGTTCTAACGACACCTTTACCTGATGAACTCAACTTTAGAAGGCGGAAGCTTTATCCCCCTGAGGATACCACAAGATGCTTTGGAATACTGACAGCCAAACCCATACCTCAGATTCCGCACTTTCCTGTGTACACACGCTCTGGAGAGGTTACCATATCTATTGAGTTGAAGAAGTCTGGTTTCACGTTATCTCTACAAATGCTTGAGTTGATTACAAGACTTCACCAGTATATATTCTCACATATTCTTCGGCTTGAAAAACCTGCACTAGAATTTAAACCCACAGACGCTGACTCAGCATACTGTGTTCTACCTCTTAATGTTGTTAATGACTCCAGCACTTTGGACATTGACTTTAAATTCATGGAGGATATCGAGAAATCTGAAGCTCGCATAGGCATTCCCAGTACAAAGTATTCAAAAGAAACTCCCTTTGTTTTTAAATTAGAAGATTACCAAGATGCAGTTATCATTCCAAGATATCGCAATTTTGATCAGCCTCATCGATTTTATGTAGCTGATGTGTACACTGATCTTACCCCCCTGAGTAAATTTCCTTCCCCTGAATATGAAACTTTTGCAGAATATTATAAAACAAAGTATAACCTTGACCTGACCAATCTCAACCAGCCGCTGCTGGATGTGGACCACACATCTTCAAGTGCTGAAAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGTTCCAGAACTTTGTGCTATACATCCAATTCCAGCATCACTGTGGAGAAAAGCGGTTTGTCTCCCCAGCATACTTTATCGCCTTCACTGCCTTTTGACCGCAGAGGAGCTAAGAGCGCAGACAGCCGGCGACGCTGGTGTGGGAGTGAGGTCACTGCCCGCGGATTTTAGATACCCCAACTTAGACTTCGGGTGGAAAAAATCTATTGACAGCAAATCTTTCATCTCAGTTGCTAACTCCTCTTCAGCTGAAAATGAGAATTACTGTAAGCACAGCACAATTGTCGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCCTGTCTAGAAAATCATGACCAAATGTCTGTGAACTGCAGAACGTTGTTCGAGTCACCTGGTAAGCTCCAAATTGAAGTTTCAGCAGATCTTACAGCAATTAATGGTCTTTCTTACAATAAAAATCTTGCCAATGGCAGTTACGATTTAGCTAACAGAGACTTTTGCCAAGGAAACCATCTGRATTACTACAAGCAGGAAATACCTGTACAACCAACTACCTCATATCCCATTCAGAATTTATACAATTATGAGAACCAGCCCAAGCCCAGCGATGAATGTACTCTACTGAGTAATAAATACCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCCGCGACGGCCGCCGTGCCTGGTACTACAGAGACTGGTAAGGCGCTCACGGACAGGACGGCTTCTGAGCAGAGCCCTTCCCCCGGGTACTCCTCGAGAACGCTTGGCCCAAACCCTGGACTTATTCTTCAGGCTTTGACCCTTTCAAATGCTAGTGATGGATTTAACCTGGAGCGGCTCGAAATGCTTGGCGACTCCTTTCTAAAGCATGCCATCACCACGTATCTCTTTTGCACTTATCCCGATGCTCACGAGGGCCGCCTTTCCTATATGAGAAGCAAAAAGGTCAGCAACTGTAATCTGTATCGGCTTGGAAAAAAGAAGGGGCTGCCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGTAACACAGAGAAATGGGAAAAAGATGAAATAACAAAAGACTGCATGCTGGCTAATGGCAAACTGGACGCGGACTTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACCTGATGTGGAGGGCTCCAAAGGAGGACGCGGATGACGAAGATGACTTCCTGGAGTACGATCAGGAGCACATCCAGTTCATAGACAACATGCTGATGGGGTCAGGAGCCTTTGTAAAGAAGATCTCGCTTTCTGCTTTCTCAGCCACTGATTCTGCCTATGAATGGAAAATGCCCAAAAAGTCCTCCTTAGSTAGTATACCATTTTCATCAGATTTTGAGGATTTTGACTATAGCTCTTGGGATGCAATGTGCTATCTGGATCCTAGCAAAGCTGTTGAAGAGGATGACTTTGTGGTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGTGTTGACACAGGGAAACAGTCCATTTCTTACGACCTGCACACCGAGCAGTGCATTGCTGACAAAAGCATAGCCGACTGTGTGGAAGCCCTGCTGGGCTGCTATTTAACCAGCTGTGGCGAGAGGGCTGCTCAGCTTTTCCTCTGTTCGCTGGGGCTGAAGGTGCTCCCGGTAATTAAGAGGACTGATCGGGAAAAGGCCATGTGCCCGACCAGGGAGAATTTCACCAGCCAACAAAAGAACCTTTCAGGGAGCCGCGCTGCCGCCTCTGGAGCTGGCTCCCGCTCCTCTGTGTTGAAAGACTTGGAGTATGGGTGTTTGGAGATCCCACCGAGATGTATGTTTGATCACCCAGATGCAGATAGGACACTGAGTCACCTTATCTCGGGTTTTGAAAATTTCGAAAAGAAAATCAACTACAGATTCAAGAATAAGGCTTACCTACTACAGGCTTTTACGCACGCCTCCTACCACTACAACACTATCACTGATTGTTACCAGCGCTTAGAATTCCTGGGAGATGCAATTTTGGACTACCTCATAACCAAGCACCTTTATGAAGACCCACGGCAGCACTCCCCAGGGGTCCTGACTGACCTGCGCTCGGCTCTGGTCAACAACACCATCTTTGCATCGTTGGCTGTGAAGTATGACTACCACAAGTACTTTAAAGCAGTTTCTCCTGAGCTCTTCCACGTCATCGATGATTTTGTGCAGTTTCAGCTCGAGAAGAATGAAATGCAAGGGATGGATTCCGAGCTTAGGAGATCTGAGGAGGATGAAGAGAAGGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATAGCGGGATGTCGCTGGAGATGGTTTGGCAGGTGTACTATCCTATGATGCGGCCGCTGATAGAAAAATTTTCTGCAAATGTGCCCCGTTCCCCTGTGCGAGAATTGCTTGAAATGGAACCAGAAACCGCCAAATTTAGCCCGGCTGAGAGAACTTATGATGGCAAGGTCAGAGTCACCGTGGAAGTAGTAGGAAAGGGGAAATTCAAAGGTGTTGGCCGAAGTTACAGGATTGCCAAATCTGCAGCAGCAAGAAGAGCCCTACGAAGCCTCAAAGCTAATCAACCTCAGGTTCCCAACAGCTGA

Related Sequences

bmy_14185T0 SequenceType object (3)

Length: 1919 aa      View alignments
>bmy_14185T0
MSCYLGYELIQTWKLKELRISILSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETDIEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAGDAGVGVRSLPADFRYPNLDFGWKKSIDSKSFISVANSSSAENENYCKHSTIVVPENAAHQGANRTSCLENHDQMSVNCRTLFESPGKLQIEVSADLTAINGLSYNKNLANGSYDLANRDFCQGNHLBYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPATAAVPGTTETGKALTDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNTEKWEKDEITKDCMLANGKLDADLEEEEEEEEEEDLMWRAPKEDADDEDDFLEYDQEHIQFIDNMLMGSGAFVKKISLSAFSATDSAYEWKMPKKSSLXSIPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSRAAASGAGSRSSVLKDLEYGCLEIPPRCMFDHPDADRTLSHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS*