Part of scaffold_957 (Scaffold)

For more information consult the page for scaffold_957 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDLBP ENSTTRG00000015251 (Bottlenosed dolphin)

Gene Details

high density lipoprotein binding protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014457, Bottlenosed dolphin)

Protein Percentage 71.18%
cDNA percentage 77.78%
Ka/Ks Ratio 0.43241 (Ka = 0.2179, Ks = 0.5039)

HDLBP ENSBTAG00000004315 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005656, Cow)

Protein Percentage 76.47%
cDNA percentage 78.43%
Ka/Ks Ratio 0.19739 (Ka = 0.1682, Ks = 0.8523)

HDLBP  (Minke Whale)

Gene Details

high density lipoprotein binding protein

External Links

Gene match (Identifier: BACU012552, Minke Whale)

Protein Percentage 33.76%
cDNA percentage 49.27%
Ka/Ks Ratio 0.04909 (Ka = 0.6847, Ks = 13.9459)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2814 bp    Location:294793..257408   Strand:-
>bmy_14206
ATGAGCTCCGTCGCAGTTCTGACCCAAGAGAGCTTTGCTGAACACCGMAGTGGACTGGTTCCGCAACAAATCAAAGTTGCCACTTTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTCCCCCCACTCCCTGAGAAAACAGCTTGCTTGGAAAATGCCCAGGAACCTGCTGGCGTCTGGAATAACAAGATCCGGCCCATCAAGGCTTCTGTCATCACTCAGGTGTTCCATGTACCCCTGGAGGAGAGGAAATACAAGGACATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGCCTTGAGATCATGCAGAGGACTGGCGCTCACCTGGAGCTGTCTCTCGCCAAAGACCAGGGCCTCTCCATCATGGTTTCAGGGAAGCTGGACGCGGTCATGAAAGCCCGGAAGGACATTGTTGCTAGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACTGCAAGACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCCCACGCCCAGATGACGCCAGCAATCAGATCAGGATCACCGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAGGTCCTGCTCATCTCCGCCGAGCAGGACAAACGTGCTGTGGAGAGGCTGGAAGTAGAGAAGGCGTTCCACCCCTTCATCGCGGGGCCGTACAATCGGCTGGTCAGCGAGATCATGCAGGAGACGGGGACACGCATCAACATACCCCCGCCCAGCGTCAGCCGGACCGAGATCGTCTTCACGGGGGAGAAGGAGCAGCTGGCCCAGGCGGTGGCTCGCATCAGGAAGATCTACGAGGAGAAGAAAAAGAAGACCACAACCATCGCGGTAGAGGTGAAGAAATCCCAGCACAAGTATGTCATCGGGCCCAAGGGCAATTCCCTGCAGGAGATCCTGGAAAGAACTGGAGTTTCTGTGGAGATCCCACCTTCAGACAGCATCTCAGAGACTGTGATACTTCGAGGCGAGCCTGAAAAGCTGGGGCAGGCGTTGACTGAAGTCTATGCCAAGGCCAACAGTTTTACGGTCTCCTCCGTCTCTGCTCCTTCCTGGCTTCACCGTTTCATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGTCCACATCGAGTTCACAGAGGGCGAGGACAGGATCACCCTGGAAGGCCCCACGGAGGATGTAAACGTGGCCCAGGAACAGATCGAAGCCATGGTCAAGGACTTGATTACCCGGATGGACTACGTGGAGATCAACATCGACCACAAGTTCCACAGACACCTCATCGGGAAGAGCGGGGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCTGTGCGCATCCCTCCCGACAGCGAGAAGAGCAACCTGATCCGCATCGAGGGGGACCCGCAGGGCGTGCAGCAGGCCAAGCGTGAGCTGCTGGAGCTCGCCTCCCGCATGGAAAACGAGCGTACCAAGGATCTAATCATTGAGCAGAGATTTCATCGCACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAATTCGGGACAAATTCCCAGAGGTCATCATCAACTTTCCAGACCCAGCACAGAAAAGCGATATTGTCCAGCTTAGAGGGCCCAAGAATGAGGTGGAAAAATGCACAAAATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCTTCAAACAGTTTCACAAGAACATCATTGGGAAAGGAGGTGCAAACATTAAAAAGATCCGGGAAGAAAGCAACACCAAGATCGACCTTCCTGCAGAGAACAGCAACTCGGAGACCATCATCATCACAGGCAAGCGAGCCAACTGCGAGGCCGCCCGGAGCCGCATTCTGTCCATCCAGAAAGACCTGGCCAACATAGCCGAGGTGGAGGTCTCCATCCCTGCCAAGCTGCACAACTCGCTCATCGGCACCAAGGGCCGCCTCATCCGCTCCATCATGGAGGAGTGCGGTGGGGTCCACATCCACTTCCCCGTGGAGGGTTCGGGAAGTGACACCGTGGTCATCAGGGGCCCTTCCTCGGACGTGGAGAAGGCCCGGAAACAGCTCCTGCACCTGGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTCGACATCCGCGCCAAGCCAGAGTATCACAAGTTCCTCATCGGCAAAGGGGGCGGCAAAATCCGCAAGGTGCGTGACAGCACCGGAGCCCGCGTCATCTTCCCGACGGCTGAGGACAAGGATCAGGACCTGATCACCATCATAGGGAAGGAGGACGCCGTCAGGGAGGCTCAGAAGGAGCTGGAGGCCCTGATCCAGAACCTGGACAACGTGGTTGAAGACTACATGCTGGTGGACCCTAAGCACCACCGTCACTTCGTCATCCGGAGAGGCCAGGTCCTGCGGGAGATCGCTGAGGAGTACGGCGGGGTGATGGTTAGCTTCCCACGCTCCGGCACACAGAGCGACAAAGTCACCCTCAAGGGGGCCAAGGACTGCGTGGAGGCGGCCAAGAAGCGCATCCAGGAGATCATCGAGGACCTGGTGGGCGCCCGGGAGGCTCGGCAGGGTTCCGGGCCCCAAGGCGGGTGGGCATCGCACAAGGACCGGCCCCCCCAAGGGGAGAGGTCCCCTGAAAAGGGGGGGGGGTTTCTGAAGCAGCCTTTAGAACCTCGCCCTCCTCGTGGATCAGCCCGGCCTCCGGACGTCCTCTGGCCGTTGTGGCCACGCTTGCGGGATGGCACCTAA

Related Sequences

bmy_14206T0 Protein

Length: 938 aa      View alignments
>bmy_14206T0
MSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKTACLENAQEPAGVWNNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDASNQIRITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVSEIMQETGTRINIPPPSVSRTEIVFTGEKEQLAQAVARIRKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVSAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDRITLEGPTEDVNVAQEQIEAMVKDLITRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKARKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPTAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLVGAREARQGSGPQGGWASHKDRPPQGERSPEKGGGFLKQPLEPRPPRGSARPPDVLWPLWPRLRDGT*