Sequence detailsbmy_14320 (Coding sequence)

Part of scaffold_961 (SequenceType object (1))

For more information consult the page for scaffold_961 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL11A2ENSTTRG00000004283 (Bottlenosed dolphin)

Gene Details

collagen, type XI, alpha 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004034, Bottlenosed dolphin)

Protein Percentage 64.42%
cDNA percentage 64.95%
Ka/Ks Ratio 0.85872 (Ka = 0.0491, Ks = 0.0571)

COL11A2ENSBTAG00000000601 (Cow)

Gene Details

collagen alpha-2(XI) chain precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000793, Cow)

Protein Percentage 93.71%
cDNA percentage 90.32%
Ka/Ks Ratio 0.19427 (Ka = 0.0448, Ks = 0.2308)

Genome Location

Sequence SequenceType object (2)

Length: 4917 bp    Location:195711..167703   Strand:-
Raw sequence 
>bmy_14320
ATGGTGGGGTCCTCCAGCAGGGCCACTGTGGTCCAGCTGCTGCTGGAGTCAGGAGTAGATGCCAGTGTTGATGGGCCCTGTTCAGGAGCAAGTGCAGCCCCTGTGGATGTGCTGCGGGCCCTGAGGTTCCCCTCCCTCCCTGACGGTGTCCGGAGGGCGAGAGGCATCTGTCCAGCTGATGTGGCTTACCGAGTGTCCCGACCCGCCCAGCTCAGTGCACCCACCCGCCAGCTCTTCCCAGGAGGCTTTCCCAAAGACTTCTCTCTACTGACTGCTGTCCGGACCCGCCCTGGCCTCCAGGCTCCCCTCCTGACTGTCTATAGTGCCCAGGGCATCCGACAACTGGGCCTGGAGCTCGGCCAACCTGTCCGCTTCCTGTACGAGGACCAGACTGGACGGCCTCAACCCCCTGCCCAGCCCGTCTTCCGAGGCCTCAGCCTAGCAGATGGCAAATGGCACCATGTGGCTGTGGCTGTGAAGGGCCAGTCGGTCACCCTCATAATTGATTGCAAGAAGCGAGTCACCCGGCCCCTCCCCCGAAGTGCTCATCCAGTTTTGGACACCCGAGGCGTGATCATCTTTGGTGCTCAGATCCTGGATGAAGAAGTCTTTGAGGGTGATGTTCAGGAGCTTGCCATCGTCCCGGGGGTGCAAGCTGCCTATGAATCCTGTGAACAGAAAGAGCTGGAGTGTGAGGGGGGTTGGAGGGAGAGACCTCAGAGACAACAGTCTCACAGAGCCCAGAGATCTCCGAAGCAGCAACCACCAAGACTTCATAGGTCACAAAACCAGGAACCCCAGCAACAGTCCACTGAGTCTCTCTACTATGACTACGAGCCCCCCTATTACGACGTGATGACTACGGGGACCACCCCTGATTATCAGGACCCCACCCCAGGTGAAGAGGAAGGAAACCTGGAGTCACGCCCCTTGCCACCCCCTGAGGAGGAGCAGACAGATCTCCAGGTCCCCTCCACAGCCGACAGGTTCCTGACAGAGGAATATGGGGAGGGTGGCACAGACCCCACAACAGGGCCCTACGATTACACCTATGGCTATGGGGACGATTATCGTGAGGAGACGGAGCTTGGCCCTGCACTCTCTGCGGAGACAGCCCACTTGGGAGCCGCTGCCCGTGGTCCCCAGGGGCTGAAAGGAGAGAAGGGGGAGCCTGCGGTGCTGGAACCTGGTATGCTAGTGGAGGGGCCCCCTGGTCCAGAAGGCCCTGCGGGATTTCCTGGTCCCCCTGGCATCCAAGGCAATCCAGGCCCAGTYGGAGACCCAGGCGAGAGGGGCCCCCCTGGCCGAGCAGGGCTCCCTGGATCAGATGGGGCCCCTGGCCCTCCCGGCACATCCCTCATGCTCCCATTCCGGTTTGGCAGTGGTGGGGGTGACAAGGGCCCCGTGGTGGCGGCCCAGGAGGCCCAGGCCCAGGCAATTCTGCAGCAGGCACGGCTGGCGCTCCGAGGACCCCCGGGTCCCATGGGATACACGGGCCGCCCTGGACCCTTGGGACAACCTGGGAGCCCTGGACTGAAAGGAGAATCTGGAGACCTAGGACCTCAGGTGACAGCCCTCACCCACCTGATCCCCAAACCAGTGCCCCCCCCTCTGTCTATACCCACTAACCCTGCCCCTGCCTCTCCCTCCCAGGGCCCCAGAGGACCTCAGGGCCTCATGGGCCCCCCTGGCAAGGCTGGGCGAAGGGGCCGAGCGGGTGCTGATGGAGCCCGAGGGATGCCTGGGGAACCTGGAGTGAAGGGTGACCGAGGATTTGATGGCCTCCCAGGGCTACCTGGGGAGAAAGGACACAGGGGTGATACTGGTGCCCAGGGCCTTCCTGGGCCCCCCGGCGAGGATGGAGATCGGGGAGACGACGGGGAGATTGGGCCTCGGGGGCTGCCTGGAGAGTCGGGACCTCGAGGTCTCCTTGGCCCCAAAGGTCCACCTGGGATTCCTGGGCCCCTGGGAGTCCGAGGCATGGATGGTCCCCATGGTCCCAAAGGAAGCTTGGGACCCCAGGGAGAGCCAGGACCTCCTGGACAACAGGGCACTCCTGGGACCCAGGGTCTCCCTGGGCCCCAGGGTGCCATCGGCCCTCATGGAGAGAAGGGTCCTCGAGGGAAACCAGGGCTTCCTGGCATGCCTGGCTCAGATGGACCCCCGGGTCACCCGGGCAAAGAAGGTCCCCCTGGAACCAAAGGAAACCAGGGTCCATCTGGACCTCAGGGTCCTCTGGGATACCCAGGACCTCGAGGCGTCAAGGGTGTGGATGGAATTCGGGGTCTGAAGGGTCACAAGGGTGAAAAGGGCGAGGATGGCTTTCCTGGGTTCAAAGGTGACATGGGTGTGAAAGGTGACAGGGGCGAGATTGGAGTCCCTGGTTCCAGGGGAGAGGATGGTCCCGAGGGGCCGAAGGGACGCACTGGACCCACTGGAGACCCTGGCCCCCCTGGGCTCATGGGCGAGAAGGGGTCTCTGGGTTTTCCTGGTTTTCCTGGAGCCAGTGGAGAGAAGGGAGCCCGTGTAAGCTGGGGAAGGGTGGGTGTGCAGAGGGAGGGGCAGCTCTGGGAGCAGGGGCCTCACGCCCTGGGTGATGTGTTGTCTCTGCTTCGTTCCCACCAGGGCCTGTCGGGGAAATCAGGGCCTCGGGGAGAACGTGGCCCCACGGGTCCACGGGGTCAGCGGGGACCCCGAGGTGCCACTGGGAAGTCTGGAGCTAAGGGAACATCGGGTGGCGATGGCCCCCATGGGCCCCCCGGAGAGAGGGGTCTCCCTGGACCTCAGGGCCCCAACGGATTTCCTGGCCCCAAAGGACCTCCAGGCCCCCCTGGGAAGGACGGCCTGCCGGGACACCCAGGCCAGAGAGGAGAAGTGGGTTTCCAAGGGAAGACCGGCCCCCCTGGCCCCCCAGGAGTGGTGGGACCCCAGGGAGCCGCAGGAGAAACCGGGCCCATGGGGGAGCGAGGTCACCCAGGCCCCCTGGGACCCCCTGGAGAGCAGGGCCTCACTGGAACAGCTGGAAAAGAAGGGACAAAGGGTGACCCTGGGCCCCCTGGGGCCCCAGGGAAGGATGGTCCCGCTGGTCTGAGGGGCTTCCCGGGAGAGAGAGGCCTCCCTGGCACTGCTGGCGGACTTGGTTTGAAGGGAAATGAAGGTCCGGCTGGTCCCCCTGGCCCTGCAGGCTCCCCTGGGGAGCGAGGTGCAGCAGGATCTGGGGGACCCATTGGCCCCCCAGGGCGCCCAGGGCCGCAAGGTCCCCCTGGAGCAGCAGGAGAGAAAGGCGTTCCGGGTGAGAAGGGCCCCATCGGTCCGACTGGCCGCGATGGGGTACAGGGTCCCGTGGGGCTTCCTGGCCCTGCTGGCCCCCCGGGCATGGCAGGAGAGGATGGAGACAAGGGTGAGGTGGGAGACCCCGGACAGAAGGGCACTAAAGGGAACAAGGGGGAACATGGCCCTCCTGGACCCCCTGGACCCATTGGTCCCGTGGGGCAGCCTGGAGCCGCGGGGGCAGATGGGGAGCCTGGAGCTCGGGGTCCACAGGGACACTTTGGAGCCAAAGGTGATGAGGGAACCAGAGGATTCAATGGGCCCCCAGGACCCATTGGTCTACAGGGTTTGCCAGGCCCCTCGGGGGAGAAGGGAGAAACAGGAGACGTGGGCCCTATGGGACCCCCCGGGCCCCCAGGACCTCGAGGCCCAGCTGGACCCAATGGAGCCGATGGTCCACAAGGTCCCCCTGGAGGTGTTGGGAACCTGGGTCCCCCTGGAGAGAAGGGGGAGCCAGGAGAGCCAGGATCTCCGGGAGTCCAGGGCGAGCCAGGGGTCAAGGGTCCACGCGGGGAACGTGGGGAGAAAGGAGAGTCGGGGCAGCCAGGAGAGGCGGGACCACCAGGGCCTAAGGGCCCCACCGGTGATGATGGCCCCAAAGGGAACCCTGGTCCTGTTGGCTTTCCTGGTGACCCTGGCCCTCCTGGAGAAGGTGGCCCTCGGGGCCAGGATGGTGCTAAGGGTGACCGCGGAGAAGATGGAGAGCCAGGACAGCCTGGATCCCCTGGTCCCACTGGGGAGAATGGGCCTCCTGGACCACTTGGAAAGCGGGGACCTGCTGGTGCGCCTGGTCCTGAGGGGCGACAAGGAGAGAAGGGAGCCAAGGGGGATCCTGGTGCTGTGGGCGCCCCGGGAAAGACAGGCCCTGTGGGTCCTGCAGGCCCAGCAGGAAAACCTGGTCCTGATGGTCTGCGGGGGCTCCCGGGCTCAGTGGGTCAGCAAGGCCGTCCCGGGGCCACAGGCCAGGCTGGGCCTCCAGGCCCTGTGGGACCCCCAGGGCTTCCTGGCCTCCGGGGTGATGCTGGGGCCAAGGGAGAGAAGGGTCACCCAGGTCTCATTGGACTGATTGGCCCCCCGGGGGAGCAGGGAGAGAAGGGTGATCGAGGGCTTCCTGGTCCTCAGGGATCCACAGGGCCAAAGGGGGAGACGGGCATCCCAGGAGCATCTGGCCCTATTGGTCCTGGAGGGTCCCCTGGCTTCCCTGGACCTGCTGGCCCCAAAGGAGCCAAAGGAGCCACAGGCCCAGCCGGACCTAAGGGAGAGAAGGGCGTCCAGGGCCCTCCAGGACACCCGGGCCCCCCCGGCGAGGTGATCCAGCCCCTGCCCATCCAGATGCCCAAGAAGACTCGGCGCTCAGTGGATGGAAGCCAGCTGATGCAGGAAGATGAGGCCGTGCCAACTGGGGGGGCCCCGGGCAGTCCTGGGGGGCTGGAGGAGATCTTTGGCTCTCTGGACTCCCTGCGAGAGGAGATTGAGCAGATGAGGCGGCCGACGGGGACCCATGACAGCCCCGCTCGCACTTGCCAGGACCTGAAGCTCTGCCACCCAGAGCTGCCCGACGGTCAGTGCCAGGGACACGACATGTGA

Related Sequences

bmy_14320T0 SequenceType object (3)

Length: 1639 aa      View alignments
>bmy_14320T0
MVGSSSRATVVQLLLESGVDASVDGPCSGASAAPVDVLRALRFPSLPDGVRRARGICPADVAYRVSRPAQLSAPTRQLFPGGFPKDFSLLTAVRTRPGLQAPLLTVYSAQGIRQLGLELGQPVRFLYEDQTGRPQPPAQPVFRGLSLADGKWHHVAVAVKGQSVTLIIDCKKRVTRPLPRSAHPVLDTRGVIIFGAQILDEEVFEGDVQELAIVPGVQAAYESCEQKELECEGGWRERPQRQQSHRAQRSPKQQPPRLHRSQNQEPQQQSTESLYYDYEPPYYDVMTTGTTPDYQDPTPGEEEGNLESRPLPPPEEEQTDLQVPSTADRFLTEEYGEGGTDPTTGPYDYTYGYGDDYREETELGPALSAETAHLGAAARGPQGLKGEKGEPAVLEPGMLVEGPPGPEGPAGFPGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQVTALTHLIPKPVPPPLSIPTNPAPASPSQGPRGPQGLMGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGDRGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPLGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEIGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGSLGFPGFPGASGEKGARVSWGRVGVQREGQLWEQGPHALGDVLSLLRSHQGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPLGPPGEQGLTGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGLGLKGNEGPAGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGMAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGEPGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGAPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGPKGETGIPGASGPIGPGGSPGFPGPAGPKGAKGATGPAGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSQLMQEDEAVPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTHDSPARTCQDLKLCHPELPDGQCQGHDM*