Sequence detailsbmy_14337 (Coding sequence)

Part of scaffold_961 (SequenceType object (1))

For more information consult the page for scaffold_961 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PHF1ENSTTRG00000006918 (Bottlenosed dolphin)

Gene Details

PHD finger protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006541, Bottlenosed dolphin)

Protein Percentage 99.12%
cDNA percentage 98.88%
Ka/Ks Ratio 0.14169 (Ka = 0.0042, Ks = 0.0296)

BT.20328ENSBTAG00000001634 (Cow)

Gene Details

PHD finger protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002140, Cow)

Protein Percentage 98.94%
cDNA percentage 97.35%
Ka/Ks Ratio 0.05702 (Ka = 0.005, Ks = 0.0875)

Additional orthologs identified in other species via the OPTIC pipeline.

Phf1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1923 bp    Location:376270..382024   Strand:+
Raw sequence 
>bmy_14337
CTCCTCCTGCCGCTGCCGCTGCTTTGGCTGCTGCGTCATACGCCCCAGAGCCGCCGGGACGGAGGGGCTGGGCCTGGGGACCCCCCGGTCTCTGCCTGCACGCCCCCCGACGCCCAGACGTGCCCTTCCCGCGCGGGGGGTTCGCCTCGGTCTCCCACGTCTGCCTCTGCCCGGCTCCCGGCGGCCCCAGCTGTCACTGCTAGGCCCCCCCAGGATGCAATGGCACAGCCCCCCCGGCTGAGCCGCTCTGGTGCCCCCCCACTTTGGGACCCAGCTTCCCCTGCTCCCACCTCAGGCCCCAGACCTCGACTTTGGGAGGGTCAAGATGTGCTGGCCAGATGGACAGATGGGCTGCTATACTTGGGGACCATCAAAAAGGTGGACAGTGCTCGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTCCCAGTTTCTGGTTCTATGGAAAGACATCAGCCCTGCTGCCCTCCCTGGGGAGGAACTCCTCTGCTGTGTATGTCGCTCTGAGACTGTGGTCCCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTCGCCACGCTTATCACCAGGACTGCCACGTTCCAAGGGCCCCAGCCCCCGGAGAGGGAGAGGGCACATCCTGGGTCTGCCGCCAGTGCGTCTTTGCCATCGCTACCAAGAGGGGAGGTGCGCTGAAGAAGGGCCCCTATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGCCGTACGGACTAAAGGGGTTGGACTGGGACGCTGGGCATCTGAGCAACCGGCAGCAGAGCTACTGTTACTGTGGTGGCCCTGGGGAGTGGAACCTGAAGATGCTGCAGTGCAGGAGCTGCCTACAGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTACGGGGACAGGTTCTATGAGTTTGAATGCTGTGTGTGTCGGGGGGGCCCTGAGAAGGTCCGGAGGTTACAGCTTCGCTGGGTGGATGTGGCCCATCTTGTCCTCTACCACCTCAGCGTTTGCTGTAAGAAAAAATACTTTGATTTTGACCGTGAGATCCTCCCCTTCACCTCTGAGAATTGGGACAGTTTGCTCCTTGGGGAGCTCTCAGACACCCCCAAGGGAGAACGTTCTTCCAGGCTTCTCTCTGCTCTCAATAGCCACAAGGACCGTTTCATTTCAGGGAGGGAGATTAAGAAGAGGAAATGCTTGTTTGGTCTCCATGCTCGGATCCCTCCCCCTGTGGAGCCCCCTACTGGAGATGGAGCCCCCACCAGCTTCCCTTCAGGGCAGGGCCCTGGGGGAGGGGTCTCACGTCCCCTGGGGAAGCGCCGGAGGCCGGAGCCAGAGCCCCTGAGGAGGAGGCAGAAGGGGAAAATGGAGGAGCTGGGGCCACCCTCAGCAGTGCGCAACCAGCCCGAGCCCCAGGAGCAGAGGGAGCGGGCTCGTCTGCAGAGGGCACTGCAGGCCTCAGTGTCTCCACCACCCTCCAGCCCTAACCAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCAGCAGTCCCATCCGGATGTTCGCTTCCTTCCACCCCTCTGCCAGCACCGCAGGGACCTCTGGGGATGGTGAACCCCCAGACAGGTCACCCCTGGAACTTCACATTGGTTTCCCCACAGACCTCCCTAAAAGTGCCCCCCACTCGATGACTGCCTCATCTTCCTCAGTCCCAGCCCCCTCCCCAGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGAACTGGGGGAGGAGTCCGAGGTGGGGTCGGCTACCTGTCCCGAGGGGACCCCGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGTACCTGGTTGAGTGGGGAGGAGGGGGCATCTTCTGA

Related Sequences

bmy_14337T0 SequenceType object (3)

Length: 641 aa      View alignments
>bmy_14337T0
LLLPLPLLWLLRHTPQSRRDGGAGPGDPPVSACTPPDAQTCPSRAGGSPRSPTSASARLPAAPAVTARPPQDAMAQPPRLSRSGAPPLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGHLSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGGPEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGERSSRLLSALNSHKDRFISGREIKKRKCLFGLHARIPPPVEPPTGDGAPTSFPSGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKMEELGPPSAVRNQPEPQEQRERARLQRALQASVSPPPSSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDGEPPDRSPLELHIGFPTDLPKSAPHSMTASSSSVPAPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGDPVRVLARRVRPDGSVQYLVEWGGGGIF*