Part of scaffold_1001 (Scaffold)

For more information consult the page for scaffold_1001 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TC2N ENSTTRG00000008067 (Bottlenosed dolphin)

Gene Details

tandem C2 domains, nuclear

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007624, Bottlenosed dolphin)

Protein Percentage 96.88%
cDNA percentage 97.92%
Ka/Ks Ratio 0.25181 (Ka = 0.0116, Ks = 0.0463)

TC2N ENSBTAG00000003375 (Cow)

Gene Details

tandem C2 domains nuclear protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004377, Cow)

Protein Percentage 92.03%
cDNA percentage 94.17%
Ka/Ks Ratio 0.22732 (Ka = 0.0338, Ks = 0.1486)

TC2N  (Minke Whale)

Gene Details

tandem C2 domains, nuclear

External Links

Gene match (Identifier: BACU019395, Minke Whale)

Protein Percentage 98.2%
cDNA percentage 98.8%
Ka/Ks Ratio 0.2993 (Ka = 0.0068, Ks = 0.0228)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1170 bp    Location:77210..105872   Strand:+
>bmy_14437
ATGGCAACAGAATTTATAAAGAGTTGCTGCAGAGGATGTTTCTATGGTGGAACAGAAAAGCACGACTTATCTGTGGAAAGAGACTTTAAAGCAGCAGTATCAAATAGTCAAAATACTGCTATCTGTAAACCTCCATTGACTTCCGTTTCTGTAAAGCCTCAGGTTGGCTGTACTGAGGATTATTTACTTTCCAAATTACCATCTGATGGCAAAGAAGTACCATTTGTGGTGCCCAGGTTTAAGTTATCTTATATTCAGCCCAGGATGCAAGGAACGCCTTCACATTTGGAAGAACTTGAAGGATCTGCCAGAGCATCTTTTGGAGCTAGAAAGGTAGAACTTTCCAGTTCAYCTCAGCATGGACCCAGCTATGATGTATATAACCCATTCTATATGTATCAGCACGTGTCACCTGATTTGAGTCGGCGCTTTCCTCCTCATTCAGAAACAACGAAACGATATGGATCGGATACAATTACTCTATCAGGAGATGAAAGAGATTTGGGGAGATTAAATGTGAAAATGTTTTATAATTCTTCAGTAGAGCAGATCTGGATCACAGTTTTACAGTGCAGAGATTTAAGTTGGCCCTCTAGTTATGGAGATAATCCTACTATTTCTGTAAAAGGGATACTAACATTGCCCAAACCAGTACATTTCAAATCTTCAGTCAAGGAAGGCGCTAATACTATTGAATTTATGGAAACGTTTGTATTTGCTATTAAACTCCACAGTCTACAAACTGTTTGCCATGCAGAACTTGAACTGGGGACTTGTTTTCAAGCGGTAAATAGCAGAATTCAGTTACAAATTCTTGAGGCTCAATACCTTCCAAGCTCATCAACACCCCTGACTTTGAGTTTTTTTGTGAAGGTGGCAATGTTTAGCTTGGGAGAGTTGATTTATAAGAAGAAGACACGCTTATTGAAGGCCTCCAATGGAAGAGTAAAGTGGGGAGAGRCTATGATTTTTCCACTTATACAAAATGAAAAAGAAATTATTTTTCTCATTAAGCTTTACAGTCGAAGCTCTGTAGGAAGAAGACACTTTGTGGGGCAGATTTGGATAAGTGAAGACAGTAATAACATTGAAGCAGCGAACCAGTGGAAAGAGACAGTTACAAATCCAGAAAAGGTTGTTATCAAGTGGCACAAATTAAATCCATCTTGA

Related Sequences

bmy_14437T0 Protein

Length: 390 aa      View alignments
>bmy_14437T0
MATEFIKSCCRGCFYGGTEKHDLSVERDFKAAVSNSQNTAICKPPLTSVSVKPQVGCTEDYLLSKLPSDGKEVPFVVPRFKLSYIQPRMQGTPSHLEELEGSARASFGARKVELSSSXQHGPSYDVYNPFYMYQHVSPDLSRRFPPHSETTKRYGSDTITLSGDERDLGRLNVKMFYNSSVEQIWITVLQCRDLSWPSSYGDNPTISVKGILTLPKPVHFKSSVKEGANTIEFMETFVFAIKLHSLQTVCHAELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVAMFSLGELIYKKKTRLLKASNGRVKWGEXMIFPLIQNEKEIIFLIKLYSRSSVGRRHFVGQIWISEDSNNIEAANQWKETVTNPEKVVIKWHKLNPS*