Part of scaffold_1002 (Scaffold)

For more information consult the page for scaffold_1002 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000001216 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001142, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.31%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0206)

TMEM170A ENSBTAG00000015428 (Cow)

Gene Details

transmembrane protein 170A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020505, Cow)

Protein Percentage 97.52%
cDNA percentage 94.77%
Ka/Ks Ratio 0.07344 (Ka = 0.0122, Ks = 0.1662)

TMEM170A  (Minke Whale)

Gene Details

transmembrane protein 170A

External Links

Gene match (Identifier: BACU018459, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.77%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0093)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 543 bp    Location:256923..240918   Strand:-
>bmy_14461
ATGGAGCACGAGGGGAGCGGCGACAGCGGGGGGTCGGCCGGGCTCCTGCAGCAGATCCTCAGCCTGAAGCTCGTGCCGCGCGTGGGCAACGGGACCTTGTGCCCTAACTCCACTTCTCTCTGCTCCTTCCCAGAGATGTGGTATGGTGTGTTCCTGTGGGCACTGGTGTCCTCTCTCTTCTTTCATGTCCCTGCTGGATTACTGGCCCTCTTCACCCTCAGACATCACAAATATGGTAGGTTCATGTCTGTAAGCATCCTGTTGATGGGCATCGTGGGACCAATTACTGCTGGAATCTTGACAACTAGCTTCTGTGATCAAGGAGAATTCCGTTTGGAGCATTTTGAGGAAGTTACAGTGACTAACATAATAAAAATGATTAATGATGTGGGTAACAGAAAGGACTCCCCAAGTGCAGCAATTGCTGGAGTGTACCGAGCAGCAGGAAAGGAAATGATTCCATTTGAAGCCCTCACCTTGGGCACTGGACAGACGTTTTGTGTAGTGGTGGTCTCCTTTTTACGGATTTTAGCTACTCTATAG

Related Sequences

bmy_14461T0 Protein

Length: 181 aa      View alignments
>bmy_14461T0
MEHEGSGDSGGSAGLLQQILSLKLVPRVGNGTLCPNSTSLCSFPEMWYGVFLWALVSSLFFHVPAGLLALFTLRHHKYGRFMSVSILLMGIVGPITAGILTTSFCDQGEFRLEHFEEVTVTNIIKMINDVGNRKDSPSAAIAGVYRAAGKEMIPFEALTLGTGQTFCVVVVSFLRILATL*