Part of scaffold_1005 (Scaffold)

For more information consult the page for scaffold_1005 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFNGR1 ENSTTRG00000016237 (Bottlenosed dolphin)

Gene Details

interferon gamma receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015393, Bottlenosed dolphin)

Protein Percentage 92.24%
cDNA percentage 94.12%
Ka/Ks Ratio 0.40696 (Ka = 0.0453, Ks = 0.1114)

BT.49564 ENSBTAG00000012544 (Cow)

Gene Details

interferon gamma receptor 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016650, Cow)

Protein Percentage 80.28%
cDNA percentage 87.08%
Ka/Ks Ratio 0.43321 (Ka = 0.1115, Ks = 0.2574)

IFNGR1  (Minke Whale)

Gene Details

interferon gamma receptor 1

External Links

Gene match (Identifier: BACU014337, Minke Whale)

Protein Percentage 95.29%
cDNA percentage 96.51%
Ka/Ks Ratio 0.4518 (Ka = 0.0275, Ks = 0.0608)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1404 bp    Location:628273..647879   Strand:+
>bmy_14478
ATGGTCTGCGGTGGAGGAAATGACGCAAGGCCTAGGCCCGAGGGCCGCGCCGGGGGCCGCACGCAGTTCTGGGCAGCACCCGAGTCGGTCCGGAGCAGTATGGATCTCTTCCTTTTCCTCGTCCTTATCGTGCAGGCCGGAAGCTGGGCTGAGATGGGCGCCGCGGATCAGAAGCTGTCCACGGTGCCGACACCAACCAATCTTAGAATTGAGGCCTATAACTTGAATACTGTTCTATTTTGGGATTACCCAATTATGCCACGGAGCCCTGTGTTTACCGTACAGGTGATGACCTATAGGGACGGGAAGTGGATTGATGCCTGCAATACCTCCCATCATTCTTGTAATATCTTTTCCATAATTGATGATCCRTCAAGCCCTCTCTGGGCTAGAGTTAAAGCTAGGCTTGGACAAGAGGAGTCAGTCTATGCACAGTCAAGAGAATTTATTTTATGCAAAGAAGGGAAAATTGGACCACCTAAACTGGGTATCAGAAAGAAGGAAGACCAAATCATTGTTGATATATTTCACCCTTTAATTACTGTAAATGAAAACGAACCAGAAGCCATATATGATGATGAAAATACTTGTTATACATTCACGTACAATGTGTTTGTGAGAATAAATGGAAGTGAGACCACAGATAAAATGTACATAAAGAAAGAAGATGATTGTAACGAGACTCAGTGCTTCTTAAGTATTCCTGTGTCCTCGCTGAATTCTGAGTACTGTGTTTCCGCGGAAGGAGTCTCAGAAACGTGGGCTGTTACAACTGAGAAGTCGGAAGAACTTTGTATTACCGTTTCTGATAATAACAGCACAGGTGGTGTGATAGAGGCATTTATTTGGCTGTCTGTGGTTAAAAGTGCCTCTTCAGAGACAAAATCTGAATCAAAATATATATCGCCCATCACCTACCAACCAATTGCCATAGAAAATGAGCAGCTCTCTCCAGGGACAATTTCAAGCGTGCATACTGAGGACAATCCAGGAAAAGCAGAACATGGAGAAGATCTTTCTAGTGAAACAGAAGTGGTGATCACTGAAGAAAATATTTCTGACTTGGCCCCTGGTAGCTCTCTGACCCCAGTAAAGGGAGAAAATTCTATCCACGCAAGCAGTAACCAGTCTGAAACCTGCAGCATCACTTTAAATGCGTATCACTCCAGAAATGGTTCTGATAGTGGCCTTGTGGTATCGGACAACTGCTCTGACTCAGAATTTCCCCCAAGTAATAAAAGTGAAATAAAGACAGAAGGACAAGAGTCCATAACGCTGAGAAACACTACCACCTCCTTTGGTTATGACAAACCCCATGTGTTAGTGGATCTGCTTGTAGATGAAGGTGGTAAAGAGTCCTTGATTGGTTATAGACCTACAGCAGATTCCAAAGAGTTTTCGTAA

Related Sequences

bmy_14478T0 Protein

Length: 468 aa      View alignments
>bmy_14478T0
MVCGGGNDARPRPEGRAGGRTQFWAAPESVRSSMDLFLFLVLIVQAGSWAEMGAADQKLSTVPTPTNLRIEAYNLNTVLFWDYPIMPRSPVFTVQVMTYRDGKWIDACNTSHHSCNIFSIIDDPSSPLWARVKARLGQEESVYAQSREFILCKEGKIGPPKLGIRKKEDQIIVDIFHPLITVNENEPEAIYDDENTCYTFTYNVFVRINGSETTDKMYIKKEDDCNETQCFLSIPVSSLNSEYCVSAEGVSETWAVTTEKSEELCITVSDNNSTGGVIEAFIWLSVVKSASSETKSESKYISPITYQPIAIENEQLSPGTISSVHTEDNPGKAEHGEDLSSETEVVITEENISDLAPGSSLTPVKGENSIHASSNQSETCSITLNAYHSRNGSDSGLVVSDNCSDSEFPPSNKSEIKTEGQESITLRNTTTSFGYDKPHVLVDLLVDEGGKESLIGYRPTADSKEFS*