Part of scaffold_995 (Scaffold)

For more information consult the page for scaffold_995 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LIME1 ENSTTRG00000012226 (Bottlenosed dolphin)

Gene Details

Lck interacting transmembrane adaptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011595, Bottlenosed dolphin)

Protein Percentage 76.63%
cDNA percentage 84.96%
Ka/Ks Ratio 0.95618 (Ka = 0.1701, Ks = 0.1779)

LIME1 ENSBTAG00000007501 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009867, Cow)

Protein Percentage 75.96%
cDNA percentage 81.06%
Ka/Ks Ratio 0.50708 (Ka = 0.1832, Ks = 0.3612)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 618 bp    Location:302450..303265   Strand:+
>bmy_14493
ATGGATCTGTGCCCACAATGGCTGGAGGCGTCCAGAGGCAAGACAACCAGGCCCCCGGCAGCCTTCCCACACCAGGAGCTGCCCCTGGCCACGCCCTCCACCGGCCCTGAGGCCACCTATTCCAATGTGGGGCTGGCTGCCATCCCCAGGGCCGGGCTGGCAGTCACCTCTGGGGTGTGGGCAGGGGCACAGCTGACCAGCAGCTGTGCCAGGCCTGGTCCCGAGGCCATACCCGTGGTGGCTGAGTATGCGTGTGTCCAGAAGCTCAAGGGAACAGATCGGGGCCCCCAAGGCCTGGAGCAGGGGAAAGTCGAGGCGACCCCAGCTGCTCAGGTGGACATCCTGTATTCCAGGGTCAGCAAGCCTAAAAGGAGGGACCCAGGACCTTCCACAGACCAGCCAGACCCCAAGGGTGGGGAAGCGAGTTTGGCTCTGGGGAGTGACCTGGCCTACGAGGTCCTCCCTCTCAGGGGCCTGGGCATGGACAAGAGCCTCCTGGAAAACGTGTATGAGAGCATCCAGAAGATGGGGGCTCCTGGGTACCTGGAACCCCCCAGCTCCAACTCCTACCAGGAGAGGACATGTGCAGGGCATGGAGACCCCCTGCTTCCTGTCTAA

Related Sequences

bmy_14493T0 Protein

Length: 206 aa      View alignments
>bmy_14493T0
MDLCPQWLEASRGKTTRPPAAFPHQELPLATPSTGPEATYSNVGLAAIPRAGLAVTSGVWAGAQLTSSCARPGPEAIPVVAEYACVQKLKGTDRGPQGLEQGKVEATPAAQVDILYSRVSKPKRRDPGPSTDQPDPKGGEASLALGSDLAYEVLPLRGLGMDKSLLENVYESIQKMGAPGYLEPPSSNSYQERTCAGHGDPLLPV*