Part of scaffold_1000 (Scaffold)

For more information consult the page for scaffold_1000 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRA2A ENSTTRG00000008922 (Bottlenosed dolphin)

Gene Details

transformer 2 alpha homolog (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008463, Bottlenosed dolphin)

Protein Percentage 90.4%
cDNA percentage 90.24%
Ka/Ks Ratio 0.34258 (Ka = 0.0748, Ks = 0.2184)

TRA2A ENSBTAG00000012622 (Cow)

Gene Details

transformer-2 protein homolog alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016756, Cow)

Protein Percentage 90.45%
cDNA percentage 88.11%
Ka/Ks Ratio 0.20656 (Ka = 0.073, Ks = 0.3535)

TRA2A  (Minke Whale)

Gene Details

transformer 2 alpha homolog (Drosophila)

External Links

Gene match (Identifier: BACU003148, Minke Whale)

Protein Percentage 88.94%
cDNA percentage 89.45%
Ka/Ks Ratio 0.5457 (Ka = 0.097, Ks = 0.1777)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 600 bp    Location:73093..91682   Strand:+
>bmy_14513
ATGACTGACAGCTCAAATCTGGGTAAAAGAGTCTCGCTCTCAGTCAAAATCTCCAACGGGAACTCCTGCTCGTGTAAAATCGGAGAGCAGGCAAATCCAGATCCCAACACTTGTCTAGGAGTGTTTGGCCTCAGTTTGTACACAACAGAGAGAGATCTTCGCGAAGTATTTTCTCGATATGGACCATTGAGTGGTGTCAACGTGGTTTATGACCAGCGAACTGGACGATCACGAGGATTTGCTTTTGTTTATTTCGAGAGAATAGATGACTCAAAGGAGGCTATGGAAAGGGCAAATGGAATGGAGCTGGATGGTAGAAGAATTCGTGTAGATTATTCTATCACCAAGAGAGCGCACACACCTACACCAGGCATATACATGGGCAGACCAACTCATAGTGGTGGTGGAGGCGGTGGAGGTGGTGGTGGAGGTGGAGGAGGTGGCAGACGTCGAGATTCTTACTATGATAGAGGATATGATCGTGGGTACGACAGATATGAAGACTATGATTACCGGTACAGAAGAAGATCGCCTTCTCCTTACTATAGTCGATACAGATCACGATCAAGATCTCGTTCCTACAGCCCAAGACGCTATTGA

Related Sequences

bmy_14513T0 Protein

Length: 200 aa      View alignments
>bmy_14513T0
MTDSSNLGKRVSLSVKISNGNSCSCKIGEQANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY*