Sequence details bmy_14564 (Coding sequence)

Part of scaffold_1011 (Scaffold)

For more information consult the page for scaffold_1011 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SF3B3 ENSTTRG00000005855 (Bottlenosed dolphin)

Gene Details

splicing factor 3b, subunit 3, 130kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005537, Bottlenosed dolphin)

Protein Percentage 98.01%
cDNA percentage 97.7%
Ka/Ks Ratio 0.23081 (Ka = 0.0126, Ks = 0.0544)

SF3B3 ENSBTAG00000010627 (Cow)

Gene Details

Splicing factor 3B subunit 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014050, Cow)

Protein Percentage 98.62%
cDNA percentage 94.37%
Ka/Ks Ratio 0.04163 (Ka = 0.0087, Ks = 0.2082)

SF3B3  (Minke Whale)

Gene Details

splicing factor 3b, subunit 3, 130kDa

External Links

Gene match (Identifier: BACU018179, Minke Whale)

Protein Percentage 98.65%
cDNA percentage 98.53%
Ka/Ks Ratio 0.26292 (Ka = 0.0086, Ks = 0.0329)

Additional orthologs identified in other species via the OPTIC pipeline.

SF3B3 (Human)   Sf3b3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3483 bp    Location:445356..489066   Strand:+
Raw sequence 
>bmy_14564
ATGAAAGCAAGAACCAAACAACAGGAAATTGTTGTTTCCCGGGGAAAGATCTTGGAGCTGCTTCGCCCTGACCCCAACACCGGCAAAGTACACACTCTACTAACTGTGGAAGTATTTGGTGTCATCCGGTCACTCATGGCCTTTAGGTTGACAGGTGGCACAAAAGACTACATTGTGGTTGGCAGTGACTCAGGTCGGATTGTTATCCTGGAATACCAGCCATCTAAGAATATGTTTGAGAAAATTCACCAAGAAACCTTTGGCAAGAGTGGATGCCGCCGCATTGTTCCTGGCCAGTTCTTAGCTGTCGATCCCAAAGGGCGAGCTGTTATGATTAGTGCCATTGAGAAACAGAAATTGGTGTATATCTTGAACAGAGATGCTGCAGCCCGGCTTACCATTTCATCTCCACTGGAGGCCCACAAAGCAAACACTTTAGTATATCATGTGGTCGGAGTAGATGTGGGATTTGAAAATCCAATGTTTGCTTGTCTGGAAATGGATTATGAGGAAGCAGACAATGATCCAACTGGGGAAGCAGCGGCTAATACCCAGCAGACACTTACTTTCTATGAGTTAGACCTTGGTTTAAATCATGTGGTCCGAAAATACAGTGAACCTTTGGAGGAACATGGAAACTTCCTTATTACAGTTCCAGGGGGGTCAGATGGTCCAAGTGGAGTGCTGATTTGCTCTGAAAACTACATCACCTATAAGAACTTTGGTGACCAACCAGATATCCGCTGTCCAATTCCCAGGAGACGGAATGACCTGGATGACCCTGAAAGAGGAATGATTTTTGTCTGCTCTGCCACCCATAAGACCAAGTCAATGTTCTTCTTTTTGGCCCAAACTGAGCAGGGGGATATCTTTAAGATCACTTTGGAGACAGATGAAGATATGGTTACCGAGATCCGGCTCAAGTATTTTGATACTGTGCCTGTTGCTGCTGCCATGTGTGTGCTTAAAACAGGCTTCCTTTTCGTAGCATCAGAATTTGGAAACCAGTTTGGGTATGGAAAAGTAGCAGAAGTAGACATTTTTTCCCCTTTCTCTGTGCAGATAGCTGACCTGGCCAATGAAGACACTCCACAGCTATATGTGGCCTGTGGTAGGGGACCGAGGTCATCTCTGAGAGTCTTAAGGCATGGACTTGAGGTATCAGAAATGGCTGTCTCAGAGCTACCCGGTAACCCCAATGCTGTCTGGACAGTGCGTCGGCACATTGAAGATGAGTTTGATGCTTACATCATTGTGTCTTTCGTGAATGCCACACTTGTGTTGTCCATTGGAGAGACTGTAGAAGAAGTGACTGACTCTGGGTTTCTGGGCACTACCCCAACCTTGTCCTGCTCCTTGTTAGGAGATGATGCCTTAGTGCAGGTGTATCCTGATGGCATTCGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACTCCTGGAAAGAAAACAATTGTGAAATGTGCAGTGAACCAACGACAAGTGGTGATCGCCCTGACAGGAGGAGAACTGGTCTATTTTGAAATGGATCCCTCAGGACAGCTGAATGAATACACGGAGCGGAAGGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAATGTGCCCCCTGGAGAGCAGCGGTCTCGCTTCCTGGCTGTGGGGCTGGTGGACAATACTGTCAGAATCATCTCCCTGGATCCCTCAGACTGTTTGCAACCTCTGAGCATGCAGGCTCTCCCAGCCCAGCCTGAGTCCTTGTGTATTGTGGAAATGGGTGGGACTGAGAAGCAGGATGAGCTGGGTGAGAGGGGCTCTATTGGCTTCTTATACCTGAATATTGGGCTACAGAATGGTGTGTTGCTGAGAACTGTCCTGGACCCTGTCACTGGGGATCTGTCTGACACCCGCACTAGGTACCTGGGGTCCCGTCCTGTGAAACTCTTTCGTGTCCGGATGCAAGGCCAGGAGGCAGTGTTGGCCATGTCAAGCCGCTCATGGTTGAGCTATTCTTACCAATCTCGTTTCCATCTCACCCCCCTGTCTTACGAGACCCTGGAATTTGCATCTGGCTTCGCCTCTGAACAGTGCCCTGAGGGCATTGTGGCCATCTCCACCAATACCCTGAGGATTTTGGCATTGGAGAAGCTGGGTGCTGTCTTCAATCAAGTAGCCTTTCCACTGCAGTACACACCCAGGAAATTTGTCATCCACCCTGAAAGTAACAACCTTATCATCATTGAGACTGACCACAATGCCTACACTGAGGCCACAAAAGCTCAGCGGAAGCAGCAGATGGCAGAGGAAATGGTAGAAGCAGCAGGGGAGGATGAGCGAGAGCTGGCTGCGGAGATGGCAGCAGCATTCCTCAATGAAAACCTCCCTGAGTCCATTTTTGGAGCTCCTAAGGCTGGCAATGGACAGTGGGCCTCTGTGATCCGAGTGATGAATCCTATTCAGGGGAACACACTGGACCTTGTCCAGCTGGAACAGAATGAAGCTGCTTTCAGTGTGGCTGTGTGCAGGTTCTCCAACACTGGCGATGATTGGTATGTGCTGGTGGGCGTGGCCAAAGACCTGATACTGAACCCCCGATCTGTAGCAGGGGGCTTTGTCTATACCTACAAACTCGTGAACAATGGGGAAAAACTGGAGTTTTTGCACAAGACTCCAGTGGAAGAGGTCCCTGCTGCCATTGCCCCATTCCAGGGGAGGGTRTTGATTGGTGTGGGGAAGCTTCTGCGAGTCTATGACCTGGGAAAGAAGAAGTTACTCCGAAAGTGTGAGAACAAGCATATCGCCAATTACATCTCTGGGATCCAGACAATTGGACATAGGGTAATTGTATCTGATGTCCAGGAAAGTTTCATCTGGGTTCGCTACAAGCGTAACGAGAACCAGCTTATCATCTTTGCTGATGATACCTACCCCCGATGGGTCACAACAGCTAGCCTCCTGGACTACGATACTGTGGCTGGGGCAGACAAGTTTGGCAACATTTGTGTCGTGAGGCTCCCACCTAACACCAATGATGAAGTGGATGAGGATCCCACTGGAAACAAAGCCCTGTGGGACCGGGGTTTGCTCAACGGGGCCTCTCAGAAGGCAGAAGTGATCATGAACTATCACGTGGGCGAGACAGTACTTTCGTTACAGAAGACCACGCTGATCCCTGGAGGCTCAGAATCGCTTGTCTATACCACCTTGTCAGGAGGAATTGGCATCCTTGTCCCGTTCACATCCCATGAGGACCATGACTTCTTCCAGCATGTGGAAATGCACCTCCGGTCCGAGCATCCCCCTCTCTGTGGGCGAGACCACCTCAGTTTTCGTTCCTATTACTTCCCTGTTAAGAATGTGATTGATGGAGATCTCTGTGAGCAGTTCAACTCCATGGAGCCCAACAAACAAAAGAATGTCTCTGAAGAACTGGACCGAACCCCACCTGAGGTGTCCAAGAAGCTTGAGGACATCCGGACTCGCTATGCCTTCTGA

Related Sequences

bmy_14564T0 Protein

Length: 1161 aa      View alignments
>bmy_14564T0
MKARTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNQFGYGKVAEVDIFSPFSVQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF*