Part of scaffold_1007 (Scaffold)

For more information consult the page for scaffold_1007 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FGD4 ENSTTRG00000013816 (Bottlenosed dolphin)

Gene Details

FYVE, RhoGEF and PH domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013103, Bottlenosed dolphin)

Protein Percentage 99.59%
cDNA percentage 99.46%
Ka/Ks Ratio 0.13977 (Ka = 0.0019, Ks = 0.0139)

FGD4 ENSBTAG00000005453 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007175, Cow)

Protein Percentage 96.13%
cDNA percentage 95.66%
Ka/Ks Ratio 0.1477 (Ka = 0.0183, Ks = 0.1236)

FGD4  (Minke Whale)

Gene Details

FYVE, RhoGEF and PH domain containing 4

External Links

Gene match (Identifier: BACU006092, Minke Whale)

Protein Percentage 99.39%
cDNA percentage 99.25%
Ka/Ks Ratio 0.14416 (Ka = 0.0029, Ks = 0.0198)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1476 bp    Location:164373..132629   Strand:-
>bmy_14571
ATGCAAGAATGGGAAACTACCCCTAGAATTGGTGACATCCTTCAGAAATTGGCCCCATTCCTTAAGATGTATGGAGAATATGTGAAGGGATTTGATAACGCAATGGAATTGGTTAAAAACATGACAGAGCGTATTCCCCAGTTCAAATCAATAATTGAAGAAATTCAGAAACAGAAGATCTGTGGGAGCTTGACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAGGACTACCTAAGGAAATTGCCCCCTGGTTCTCCGGACTGGAATGATGCTAAAAAATCACTTGAAATTATATCTACAGCAGCAAGTCATTCTAATAGTGCAATAAGAAAAATGGAGAACCTAAAGAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAATCCTTCAAATGAACTAATAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGAACACATCGGCACAAGAGCGCTACCTTTTCTTATTCAACAACATGTTGCTGTACTGCGTGCCAAGATTCAGCTTGGTGGGCTCTAAATTCACAGTTCGAACCAGGGTTGGCATTGATGGAATGAAAATTGTAGAGACTCACAATGAGGAATATCCACACACTTTCCAGGTATCTGGGAAAGAGAGAACACTGGAACTGCAAGCCAGTTCTGAGCAAGACAAAGAAGAATGGATCAAGGCACTTCAAGAGACAATTGATGCTTTCCATCAGAGGCATGAAACCTTCAGAAATGCAATTGCCAAGGATAATGACATTCACTCAGAGGTTTCTACTGCTGAGCTAGGAAAAAGAGCCCCAAGATGGATCCGAGATAATGAAGTTACAATGTGTATGAAATGCAAGGAGTCTTTTAATGCCCTGACGAGGAGAAGGCACCATTGTCGAGCATGTGGATATGTGGTTTGTTGGAAGTGTTCTGATTATAAAGCTCAACTTGAGTATGATGGTGGTAAATTGAGCAAAGTTTGTAAAGACTGTTATCAGATAATAAGTGGATTCACAGACAGTGAAGAAAAGAAAAGAAAAGGAATTTTAGAGATTGAATCTGCAGAAGTATCTGGAAACAGTGTGGTGTGCAGTTTTCTTCAATATATGGAAAAGTCAAAACCTTGGCAGAAAGCTTGGTGTGTGATCCCCAAACAAGACCCTCTTGTGCTGTACATGTATGGTGCCCCCCAGGATGTCAGAGCCCAGGCCACCATTCCACTCCTGGGCTACATTGTGGATGATATGCTGAGGAGTGCAGACCTGCCACACAGTTTCAAACTGACCCAGTCCAAGTCTGTGCACAGCTTTGCTGCAGACAGTGAAGAACTGAAACAGAAGTGGCTGAAAATCATCCTTTTAGCTGTCACAGGTGAGACGCCAGATGGTCCTAGTAAGCATCCAGCCACTTTGGACGATCATCCTGAACCTAAGAGAAAATCAGAATGCTGA

Related Sequences

bmy_14571T0 Protein

Length: 492 aa      View alignments
>bmy_14571T0
MQEWETTPRIGDILQKLAPFLKMYGEYVKGFDNAMELVKNMTERIPQFKSIIEEIQKQKICGSLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPGSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHSEVSTAELGKRAPRWIRDNEVTMCMKCKESFNALTRRRHHCRACGYVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYIVDDMLRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKHPATLDDHPEPKRKSEC*