Part of scaffold_1016 (Scaffold)

For more information consult the page for scaffold_1016 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SRPX ENSTTRG00000004908 (Bottlenosed dolphin)

Gene Details

sushi-repeat containing protein, X-linked

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004634, Bottlenosed dolphin)

Protein Percentage 76.73%
cDNA percentage 76.05%
Ka/Ks Ratio 0.14502 (Ka = 0.0167, Ks = 0.1153)

SRPX ENSBTAG00000004280 (Cow)

Gene Details

sushi repeat-containing protein SRPX precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005604, Cow)

Protein Percentage 77.96%
cDNA percentage 79.59%
Ka/Ks Ratio 0.32838 (Ka = 0.1698, Ks = 0.517)

SRPX  (Minke Whale)

Gene Details

sushi-repeat containing protein, X-linked

External Links

Gene match (Identifier: BACU003827, Minke Whale)

Protein Percentage 83.27%
cDNA percentage 85.44%
Ka/Ks Ratio 0.53267 (Ka = 0.1376, Ks = 0.2582)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 735 bp    Location:15428..5875   Strand:-
>bmy_14578
ATGACGCTGGAGGATGCAACAGAATTCAGTCCTGCTGCCGCTCTTAGAGGATGTAAGGGGAAGCTGGAGCCGGCGACCATGAAAGAATGTTGCCAACTGTATTTGGCCAGCAGGGGGCAGGTTGATGAGATATTTCCTGCTGATGGCGAGAATATTCTGGTTCTGTTTGCAGATATAGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAGGAACGCATTGCGGAACCCAATAAATTGACAGTCCGGGTGTCCTGGGAGACCCCTGAGGGAAGAGACACAGCAGATGGCATTCTCACTGATGTTATTCTAAAAGGCCTACCCCCAGGCTCACATTTTCCAGAAGGAGACCACAAGATCCAATACACAGTGTATGACAGAGCTGAGAACAAGGGCATTTGCAAATTTCGAGTTAAAGTAAGAGTCAGACGCTGCGGCAAACTCAACGCCCCGGAGAACGGCTACATGAAGTGCTCCAGCGACGGCGATAATTACGGGGCCACCTGTGAATTCTCCTGCATCGGAGGCTACGAGCTCCAGGGCAGCCCTGCCCGAGTGTGTCAGTCCAACCTGGCCTGGTCTGGCACAGAGCCCACCTGCGCAGCCATGAATGTCAATGTCGGCGTCAGAACAGCAGCTGCGCTTCTGGATCAGTTTTATGAGAAAAGAAGACTGCTCATTGTGTCCACACCCACAGCCCGAAACCTCCTCTACCGGCTGCAGCTGGGGATGCTGCAG

Related Sequences

bmy_14578T0 Protein

Length: 245 aa      View alignments
>bmy_14578T0
MTLEDATEFSPAAALRGCKGKLEPATMKECCQLYLASRGQVDEIFPADGENILVLFADIEPPRIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSHFPEGDHKIQYTVYDRAENKGICKFRVKVRVRRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSPARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQ