Part of scaffold_1016 (Scaffold)

For more information consult the page for scaffold_1016 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OTC ENSTTRG00000004947 (Bottlenosed dolphin)

Gene Details

ornithine carbamoyltransferase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004664, Bottlenosed dolphin)

Protein Percentage 90.4%
cDNA percentage 94.61%
Ka/Ks Ratio 1.29857 (Ka = 0.0605, Ks = 0.0466)

OTC ENSBTAG00000001488 (Cow)

Gene Details

ornithine carbamoyltransferase, mitochondrial precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001947, Cow)

Protein Percentage 96.52%
cDNA percentage 95.19%
Ka/Ks Ratio 0.11005 (Ka = 0.0166, Ks = 0.151)

OTC  (Minke Whale)

Gene Details

ornithine carbamoyltransferase

External Links

Gene match (Identifier: BACU003825, Minke Whale)

Protein Percentage 99.5%
cDNA percentage 99.67%
Ka/Ks Ratio 0.56709 (Ka = 0.0027, Ks = 0.0047)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 633 bp    Location:249059..259163   Strand:+
>bmy_14581
ATGACAGATGCAGTGTTGGCGCGAGTGTATAAACAATCAGATCTGGACATCCTGGCTAAAGAAGCATCCATCCCAATCATCAATGGGCTGTCAGATTTGTACCATCCTATCCAGATCCTGGCTGATTACCTCACTCTCCAGGAACACTACGGCTCTCTGAAAGGCCTTACCCTCAGCTGGATTGGGGATGGGAATAACATCCTGCACTCCATCATGATGAGTGCAGCGAAATTCGGGATGCACCTTCAGGTGGCTACTCCAAAGGGTTATGAGCCTGATCCCAGCATAACCAAGTTGGCAGAGCAGTATGCCAAGGAGTTCTTTAACCGGCTTGCTCGTGTATGCCAGAACGGTACCAAGCTGTCACTGATGAATGATCCATTGGAAGCGGCTCGTGGAGGCAATGCATTAATTACAGACACTTGGATAAGTATGGGGCAAGAAGAGGAGAAGAAAAAGCGGCTCCAGGCTTTCCAGGGTTACCAGGTTACAATGAAGACGGCTAAAGTTGCTGCTTCTGACTGGACATTTTTACACTGCTTGCCCAGAAAGCCAGAAGAAGTGGACGATGAAGTGTTTTATTCTCCACGATCACTTGTATTCCCAGAGGCCGAAAACAGAAAGTGGACAATC

Related Sequences

bmy_14581T0 Protein

Length: 211 aa      View alignments
>bmy_14581T0
MTDAVLARVYKQSDLDILAKEASIPIINGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQVATPKGYEPDPSITKLAEQYAKEFFNRLARVCQNGTKLSLMNDPLEAARGGNALITDTWISMGQEEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPRKPEEVDDEVFYSPRSLVFPEAENRKWTI