Part of scaffold_1016 (Scaffold)

For more information consult the page for scaffold_1016 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000004234 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003975, Bottlenosed dolphin)

Protein Percentage 88.94%
cDNA percentage 89.93%
Ka/Ks Ratio 0.44222 (Ka = 0.0869, Ks = 0.1965)

TSPAN7 ENSBTAG00000008966 (Cow)

Gene Details

tetraspanin-7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011802, Cow)

Protein Percentage 87.23%
cDNA percentage 86.1%
Ka/Ks Ratio 0.23348 (Ka = 0.0954, Ks = 0.4087)

TSPAN7  (Minke Whale)

Gene Details

tetraspanin 7

External Links

Gene match (Identifier: BACU008389, Minke Whale)

Protein Percentage 80.0%
cDNA percentage 84.32%
Ka/Ks Ratio 0.50001 (Ka = 0.1474, Ks = 0.2948)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1011 bp    Location:503779..519589   Strand:+
>bmy_14583
ATGTCAGTTCGAATGAGCTGCTCAGCTGTTGGTAAACTGAGGGAGAGACGGGCTGGGGAGCTAAAGACACAAAGTCAGCCACTGGCTTCAGCAGCTAAGGCTCCTGGGGTGTGTGGCCTGCAGGGGATGGAGAGTCAGGCATGGCGCGCGGCCCCAAGTCTATGCCCTGAAGTAAGGGCCCGAGTGATGCAAGGCTCTGTGGTTCAGACACACTGTGGGGATTTCCTTCGGGCCGATCAGCGCGACTTGACAAATCGGAATCCTACAGCAAGTGCCTGCTTGCTCGCGGAAACTGGAGTCTTCAGATTCCGGCCACATTGCTCTGTGTTGATTCTCACCTCTCTCAGCAGCAGTCTCACACTTCTCACTCCTGCTTCTTTTCAGATCACTGGGGTGATCCTGCTGGCCGTTGGAGTCTGGGGCAAACTCACTCTGGGCACCTATATTTCCCTTATTGCCGAGAACTCCACAAATGCTCCCTATGTGCTCATCGGAACTGGCACCACTATTGTCGTGTTTGGCCTGTTTGGATGCTTTGCCACATGCCGTGGTAGCCCATGGATGCTGAAACTGTATGCCATGTTTCTGTCTCTGGTGTTCCTGGCTGAACTCGTGGCTGGCATTTCCGGGTTTGTGTTTCGTCACGAGATCAAGGACACCTTCCTGAGGACTTACACTGACGCCATGCAGAATTACAATGGCAACGACGAGAGGAGCCGGGCGGTGGATCACGTGCAGCGCAGCCTGAGCTGCTGTGGGGTGCAGAACTACACCAACTGGAGCACCAGCCCCTACTTTCTGGAGCACGGCATCCCCCCGAGTTGCTGCATGAACGACACTGATTGTAATCCCCAGGATCTGCACAACCTGACCGTGGCCGCCACTAAAGTGAACCAGAAGGGTTGTTATGATCTGGTGACCAGTTTCATGGAGACCAACATGGGAATCATCGCTGGAGTGGCTTTTGGGATCGCATTCTCCCAGTTTTGCCATCAAGGGAATATTGGTTAA

Related Sequences

bmy_14583T0 Protein

Length: 337 aa      View alignments
>bmy_14583T0
MSVRMSCSAVGKLRERRAGELKTQSQPLASAAKAPGVCGLQGMESQAWRAAPSLCPEVRARVMQGSVVQTHCGDFLRADQRDLTNRNPTASACLLAETGVFRFRPHCSVLILTSLSSSLTLLTPASFQITGVILLAVGVWGKLTLGTYISLIAENSTNAPYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTFLRTYTDAMQNYNGNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNDTDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQFCHQGNIG*