Sequence detailsbmy_14594 (Coding sequence)

Part of scaffold_1018 (SequenceType object (1))

For more information consult the page for scaffold_1018 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCA6ENSBTAG00000006921 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009089, Cow)

Protein Percentage 77.25%
cDNA percentage 82.72%
Ka/Ks Ratio 0.38173 (Ka = 0.1465, Ks = 0.3837)

ABCA6 (Minke Whale)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 6

External Links

Gene match (Identifier: BACU011465, Minke Whale)

Protein Percentage 93.03%
cDNA percentage 94.41%
Ka/Ks Ratio 0.46098 (Ka = 0.0463, Ks = 0.1005)

Additional orthologs identified in other species via the OPTIC pipeline.

ABCA6 (Human)   Abca6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3549 bp    Location:477929..426933   Strand:-
Raw sequence 
>bmy_14594
ATGGCTCTGGCTACACCCCTTCTCAGAACCAGCCTGGAATCAAGTTTCAAGTCCTTTGAGTCTGGATTGTTATCTGATGGCCTAACTCTTTTGATAAAAGTTGTTCAATTCAATCTGGAAGTTCTTAAAGGAAATATTTTCCCCCAAAATATGATCAAGAAAAGTGTGTACCAGCAAACTCAAGCACTTCTGTGCAAGAATCTTCTTAAGAAATGGAGGATGAAAAGACAGAGCTTATTGGAATGGGGGTTCCCAATACTTTTAGGATTTTATATGGGCATATTTTCATATTTAAAAGAAAATGTGCATTTTCCTGAAATGCCCCCTCAGGATCTGGGAAGGGTAGATAAATTTAAYAGCTCTTCTATGGATGTTGTGTACACACCGATCTCCAACRTAACCCAGCAGATAATGAATAAGACGGCATGTGCTCCCTTTCTGAAAGGAAGAAGAGTCATCGGGGCACCAGATCAAAAATATATGGATAAAATACTTCTAGACAATTTCCCATACACCGTGGGAGTCATCTTTAATGACACTTTTTCTTATAAGTTAAAATTTTATCAGGGATATTATATTCCGATTTTGAAGGAAGATCTTTTCACAGCTCATTGTTGGGGTACAGATAATGAGTTTTCCTGTTCACTGGCTAAATACTGGAGTAGAGGATTCGTGACTTTACAAACTGCCATTAATGCTGCTATTATACAAATAGCTTTGGCATTCCTGATGACTGTGCTGTTAAAGAAAACTATCCTCACCAGTTTGGTTGTGTTTGTCCTCACTCTCTTTTGGGGGGGTGTGGGATTCACTGCATTTTATAGACAACTTCCGTCACCTTTGGAATGGATTTTCAGTATTTGTAGCCCCTTTGCCTTCACTGCTGGAATTAACCAGATTATCCACCTGGATTATAATATGAATGGTGTAATTTTTCCTGACACTTCAGGGGACTCATATATAATGATAGCAACTTTTTCCATATTGGCTTTTGATGCGCTTTTGTACTTGGTGTTGGCGTTATACTTTGACAAAATCTTACCCTATGGAAATGAGCACCGTTACTCTCCATTATTTTTCCTGAACTCATCATCTTGTTTCCAACACCAAAGGACTGATAGTAAGGTCATTGAGAAAGAAGTAGATCCTGAAATCAGAAATGTTAAAAAAGAATATAAAGAAAAAACTGGAAAAGTGGAAGTATTGAAAGGCTTGTTCTTTGACATATACGAAGGTCAAATCACAGCAATTCTGGGTCACAGTGGAGCTGGCAAATCTTCGTTGCTAAACATCCTTAATGGATTGTCTGTTCCAACAGAAGGATCAGTTACCATCTATAATAAAAATCTCTCTGAAATGCAAGACTTGGAGGAAATCCAAAAGATAACTGGTGTTTGTCCTCAATTCAATGTTCAGTTTGACATGCTCACTGTGAAGGAAAACCTCAGGCTGTTTGCTAAAATAAAAGGGATTCCGCCACAGGAAGTGGAACAAGAGGTACAAAGAATTTTATTGGAGTTGGACATACAGAACATTCAGAATAATATTGCTACACATTTAAGTGAAGGTCAGAAAAGAAAGCTGACCATTGGGATTGCCATTTTAGGAGACCCTCAAGTTTTGCTATTAGATGAGCCAACTGTGGGATTGGATCCCTTCTCAAGGCATCGAGTGTGGAGCTTCCTCAAGGAGCACAAAGCAGACCGCGTGATCCTCTTGAGTACCAACTTCATGGATGAAGCTGACATCCTGGCTGATAGAAAAGTGATCCTGTCCAGCGGGAGGGTGAAGTGTGCGGGCTCCTCTGTCTTTCTGAAGAGAAGATGGGGTCTTGGGTATCACTTAAGTTTGTACAGAAATGAAACATGTGATCCAGAAAAAATAACATCCCTCATTAATCATCACATCCCTGATGCCAAACTGAAAACAGAAAGCAAAGAAAAGCTTGTGTATACTTTGCCTGTGGAAAGGACGAATAAATTTCCAGACCTTTTCAGTGATCTCGATAAGGGTTCTGGCCTGGGCGTGATGGGCTATGACGTTTCCACGTCAACTCTGAATGAAGTCTTCATGAAACTGGAAGGAACATCAACTGCTGAGCAAGCAGAGATGATGGGGGACACAGGACGCCTGCCTGGAATGGATGCACCTTGCTCTTCTCTCCCTGAGATGCAGACGGCTGTGAGCGCCATGGGCCTCTGGAGACTGCAGTTCTGTGCAATGGCACGGCTCCGTTTCTTAAAGTTAAAACATGGGAAGAAAGCATTTTTGACCCTATTATTTGTATTTGGAATTGCAATGTTCCCTCTGATTGTGGAAAGCATACTCTATGCTGTATTAAATCAAAAGACTGATTGGGACTTTAAACCCGAACTGTATTTCCTCTCTCCTGGACAACTTCCCCAAGACCCTCGTACCAGCTTACTGATCATCAACAACACAGAATCAAATATTGAAGATTTTATACAGTCACTGAAGCATCAAAATATACTTTTGGAAGTAGATGACTTTGAAAATAGAAATGGCACTGATGACCCATCTTACAATGGAGCTATCATAGTTTCTGGTAAAAAAAGGGATTATAGATTTTCAGTTGTATGCAATACCAAGAGACTGCACTGTTTTCCTACTCTCATGAATATTGTCAGCAATGGGTTACTTCGAATGCTTAATCATACACAGCATATTCGAACCGAGAGAAGCTCATTTCCTTTTAAGAGAACTAAGTCCCAGCTGTGGATTTCAGGACTCTTCCCGTCTGCTTACTGGTGCGGTCAGGCCCTGGTGGACGTTAACCTCTACAATTTCATTCTCCTTTCAATGTATTCAGTTTTCTACGCAGCAAACATGGTACACATTCATCTCGCGAGTCGAGCTGTGCTTGCTTTGGCTGTCATTACGCTTGGGTACGCAGTTTCTCTTGTCTTCCTGACATATGTGATATCATTTATTTTTCGGAAGAGGAGAAAAAATAGTGGACTTTGGTCATTTTGCTTCTACATGACTGCAGTCATCACGTTTGGCATCATTATAATAAATCAGTTCGACTTCCGTGTCTTGATGGTTTGCATGGTATTAGTTCCCTCAATGACCTTGGGTGGATTTATAGGTTTTTTGGAAGAGCCTTACTTTCAGGCTTTGCTTTTCATTTTTGTTCTACGATGCTTGGAAATAAAGTGTGGAAAGAAAATAATGCAAAAGGATCCTGTTTTCAGAATTTCCCCTAAAAGTAGAGATGGTCGTCCAAATCCAGAAGAACCTGTAGATGAAGATGAAGACGTTCAGGCAGAAAGAATAAGAACGGCAACCGCTCTAACCATTTCCACAGAGGAGGTAGAAAAGCAAGCGACAGAATGGGTGTTAGCGGAGCTCTTCGAGGGCGGTCAAGAATGGGGGTTGATATGCTGGGTTTCGTTTAGAAAGTTTGCAGTTTGGTGCATTCAAGTAATTCTTAAACACGCAGGCGCCTCTTTTGAGGGTCCTGGATGCTCAGAGAACACAAATCACAGTGGTTTTATTTTTCTGAGAAAAATGGGCTTGGATATGTAG

Related Sequences

bmy_14594T0 SequenceType object (3)

Length: 1183 aa      View alignments
>bmy_14594T0
MALATPLLRTSLESSFKSFESGLLSDGLTLLIKVVQFNLEVLKGNIFPQNMIKKSVYQQTQALLCKNLLKKWRMKRQSLLEWGFPILLGFYMGIFSYLKENVHFPEMPPQDLGRVDKFNSSSMDVVYTPISNXTQQIMNKTACAPFLKGRRVIGAPDQKYMDKILLDNFPYTVGVIFNDTFSYKLKFYQGYYIPILKEDLFTAHCWGTDNEFSCSLAKYWSRGFVTLQTAINAAIIQIALAFLMTVLLKKTILTSLVVFVLTLFWGGVGFTAFYRQLPSPLEWIFSICSPFAFTAGINQIIHLDYNMNGVIFPDTSGDSYIMIATFSILAFDALLYLVLALYFDKILPYGNEHRYSPLFFLNSSSCFQHQRTDSKVIEKEVDPEIRNVKKEYKEKTGKVEVLKGLFFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTIYNKNLSEMQDLEEIQKITGVCPQFNVQFDMLTVKENLRLFAKIKGIPPQEVEQEVQRILLELDIQNIQNNIATHLSEGQKRKLTIGIAILGDPQVLLLDEPTVGLDPFSRHRVWSFLKEHKADRVILLSTNFMDEADILADRKVILSSGRVKCAGSSVFLKRRWGLGYHLSLYRNETCDPEKITSLINHHIPDAKLKTESKEKLVYTLPVERTNKFPDLFSDLDKGSGLGVMGYDVSTSTLNEVFMKLEGTSTAEQAEMMGDTGRLPGMDAPCSSLPEMQTAVSAMGLWRLQFCAMARLRFLKLKHGKKAFLTLLFVFGIAMFPLIVESILYAVLNQKTDWDFKPELYFLSPGQLPQDPRTSLLIINNTESNIEDFIQSLKHQNILLEVDDFENRNGTDDPSYNGAIIVSGKKRDYRFSVVCNTKRLHCFPTLMNIVSNGLLRMLNHTQHIRTERSSFPFKRTKSQLWISGLFPSAYWCGQALVDVNLYNFILLSMYSVFYAANMVHIHLASRAVLALAVITLGYAVSLVFLTYVISFIFRKRRKNSGLWSFCFYMTAVITFGIIIINQFDFRVLMVCMVLVPSMTLGGFIGFLEEPYFQALLFIFVLRCLEIKCGKKIMQKDPVFRISPKSRDGRPNPEEPVDEDEDVQAERIRTATALTISTEEVEKQATEWVLAELFEGGQEWGLICWVSFRKFAVWCIQVILKHAGASFEGPGCSENTNHSGFIFLRKMGLDM*