Sequence detailsbmy_14597 (Coding sequence)

Part of scaffold_1018 (SequenceType object (1))

For more information consult the page for scaffold_1018 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCA5ENSTTRG00000003488 (Bottlenosed dolphin)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003274, Bottlenosed dolphin)

Protein Percentage 90.4%
cDNA percentage 92.21%
Ka/Ks Ratio 0.40937 (Ka = 0.0276, Ks = 0.0673)

BT.30635ENSBTAG00000002747 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003563, Cow)

Protein Percentage 90.0%
cDNA percentage 88.19%
Ka/Ks Ratio 0.14396 (Ka = 0.0567, Ks = 0.3938)

ABCA5 (Minke Whale)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 5

External Links

Gene match (Identifier: BACU011466, Minke Whale)

Protein Percentage 97.68%
cDNA percentage 98.37%
Ka/Ks Ratio 0.49275 (Ka = 0.0129, Ks = 0.0262)

Additional orthologs identified in other species via the OPTIC pipeline.

ABCA5 (Human)   Abca5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3753 bp    Location:585151..538706   Strand:-
Raw sequence 
>bmy_14597
ATGGCTACTGCAATTAGGGAAGTTGGAGTTTGGAGACAGACCAGGACACTCCTACTGAAGAATTACCTAGTTAAATGCAGGACTAAAAAAAGTAGCGTTCAGGAAATTCTTTTTCCACTATTTTTTTTATTTTTGTTAATATTAATTAGCATGATGCATCCAAATAAGAAATATGAAGAAGTGCCTGACACGGAACTTAACCCCATGGACAAATCTATCCTCTTTAACTTAATTCTTGGATTTACACCAGTGACTAATATTACAAGAGACATCATGCAGAAGGTTTCTACTGATCACCTTCCTAGCGTCATAATTACCGAAGAATATACAAGTGAAAAAGAATTGCTAGCATCCAGTCTTTCTAAGTCCAGCAACTTTGTAGGTGTGGTTTTCAAAGACTTCATGTCCTATGAACTCCGTTTTTTTCCTGATATGATTCCAGTATCTTCTGTTTATATGGATTCAAGAGCTGGCTGTTCAAAATCATGTGAGGCTGTTCAGTACTGGTCCTCAGGGTTCACGGTTTTACAGGCCTCGATAGATGCTGCCATTATACAGTTGAAGACCAATGTTTCTTTTTGGAAGGAGCTGGAGCCAACTAAGGCTGTCCTTATGGGAGAAACTGCTGTTGTGGAAATAGATACCTTTCCCCGAGGAGTAATTTTAATATACCTAGTTATAGCATTTTCACCTTTTGGATACTTTTTGGCAATTCATATCGTAGCAGAAAAAGAGAAGAAGTTAAAAGAGTTTTTAAAGATAATGGGACTGCATGACACTGCCTTTTGGCTCTCCTGGGTCCTTCTGTATACAAGTTTGATTTTCCTCATGTCCCTTCTCATGGCAGTCATTGCAACAGCTTCTTCCTTATTCCCTCAAAGYAGCTGCTTTGTGATATTTCTACTTTTTTTCCTGTATGGCTTATCATCTGTATTTTTTGCTTTAATGCTGACACCTCTTTTTAAAAAATCAAAACATGTGGGAATAGTTGAATTTTTAGTCACTGTGGCTTTTGGATTTGTTGGCCTTTTGATAGTCCTCATGGAAAGTTTTCCCAAATCTTTAGTGTGGCTTTTAAGTCCCTTCTGTCAGTGTACTTTTTTGATTGGTATTGCACAGGTCATGCATTTAGAAGATTTTAATGAAGGTGCTTTATTTTCCAATTTGACTGAAGGKCCATATCCTCTAATTATTACTATTATCATGCTGGCCCTTAACAGCATATTCTATGTCCTTCTGGCTGTCTATCTTGATCAAGTCATTCCAGGAGAATTTGGTTTACGGAGATCATCGTTTTATTTTTTGAAGCCATCATATTGGTCAAAGAGCAAAAGAAATTATAAGGAGTTATCAGAGGGCAGTGTTAGTGGGAATATTAGTTTTAGTGAAATTGTTGAACCTGTTTCTTCAGAATTTATAGGAAAAGAAGCCATAAGAATCAGTGCTATTCAGAAGACATACAGAAAGAAAGGTGAAAATGTGGAGGCTTTGAGAAGTTTATCCTTTGACATATATGAGGGTCAGATTACTGCGTTACTTGGCCACAGTGGAACAGGAAAGAGTACGTTGATGAATATTCTTTGCGGACTGTGCCCACCTTCGGATGGGTTTGCATCTGTATATGGACACAGAGTCTCAGAAATAGATGAAATGTTTGAAGCAAGAAAAATGATTGGCATTTGTCCACAGTTAGATATACACTTTGATGTTTTGACAGTAGAAGAAAATTTATCCATTTTGGCTTCAATCAAAGGAATACCAGCCAATAACGTAATACAAGAAGTACTGTTGCTGGATGAACCGACAGCTGGAATGGACCCTTGTTCTCGTCATAGTGTTTGGAATCTTCTTAAATACAGAAAAGCTAATCGGGTGACAGTGTTTAGTACTCATTTCATGGATGAAGCTGACATTCTTGCTGATAGGAAAGCTGTCATATCACAAGGAATGTTAAAATGTGTTGGTTCTTCAATTTTTCTCAAAAGTAAATGGGGGATTGGCTACCGCCTGAGCATGTACATTGACAGATACTGTGCCACGGAATCTCTTTCTTCTCTGGTTAAACAACATATACCTGCAGCTACTTTATTACAACAGAATGACCAGCAGCTTGTGTATAGCTTGCCTTTCAAGGACATGGACAAATTTTCAGGTTTATTTGCTGCTCTAGACACTCATTCAGATTTGGGTGTTATTTCTTATGGTGTTTCCATGACGACTTTGGAAGATGTATTCTTAAAGCTAGAAGTTGAAGCGGAAATTGACCAAGCAGATTATAGTGTATTTACTCAGCAGCCACCAGAGGAAGAATTGCATTCAAAACCCTTTGATGAAATGGAGCAGAGCTTGCTTATTCTTTCTGAAACCAAGGCTTCTCTGGTGAGCACCATGAGTATTTGGAAACAGCAGGTGTTTAAAATCGCAAAGTTTCACTTCCTTACCTTGAAACGTGAAAGCAAATCAGTGAGATCAGTGTTGCTTCTGCTTTTAATTTTTTTCTCAGTTCAGATTTTTATGTTTTTGGTGCATCACTCTTTTAAAAATGCTGTTGTTCCTATCAAACTTGCTCCAGACTTATACTTCCTAAAACCTGGAGATAAACCTGACAAATACAGAACAAGTCTGCTTCTTCAAAATTCTACCGACTCAGATATCAGTGATCTTCTTAGCTTTTTCACCAACCAGAACATAATGGTGACAATGTTTAATGACAGTGACTACGTGTCTGCCGCTCCGCACAGCGCAGCTTTAAATGTGATGCAGTCAGAAAAGGACTATGTTTTTACTGCTGTTTTCAACAGTACTATGGTTTATTCTTTACCTGTATTGATGAATATCATTAGTAACTACTATCTTTATCATTCAAATGTGACTGAAAGCATCCAGGTCTGGAATACCCCATTCGTTCAAGAAATTACAGACATAGTTTTTAAAATTGAGCTGTATTTTCAAGCAGCTTTACTTGGGGTTATTGTTACCGCGATGCCACCTTACTTTGCCATGGAGAATGCAGAGAATCATAAGATCAAAGCTTACACTCAACTTAAACTTTCGGGGCTTCTGCCTTCTGCATACTGGATTGGACAGGCTCTTGTTGACGTCCCCTTATTCTCTGTGGTTCTTACTTTGATGTTAGGCAGTTTATTTTCATTTCATTATGGATTATATTTTTATGCTGTCAAGTTCCTTTCTGTGGTTTTTTGCCTTATTGGATATGTTCCATCAGTTATTCTGTTCACCTATATGACTTCTTTCACTTTTAAAAAAATTGTAAATACCAAAGAATTTTGGTCATTTATCTATTCTGTGACAGCATTGGCTTGCATTGCAGTCACCGAAATAACTTATTTTATGGGATATACAGTTACGGTTATTCTTCATTATGCCTTGTGCATAGCCATTCCAATCTATCCGTTTCTGGGTTGCCTGATTTGTTTCATAAAGCCTTACCTGCAGTGTGTGCTGTGGATTTTCCTCTTGCAGACCCTAACAACAAAGTCCAAAAGTAGGAAGTTTCCGGAACCACCAAACAATGAGGATGAAGATGAAGATGTCAGAGCTGAAAGGGTGAAGGTCAAAGAATTGCTGAGCTGCCAGCGCCACGAGGAGAAGCCAGCCATTATGGTCAACAATTTGCATAAAGAATATGAAGACAAGAAAGATTTTTTTCTTACAAGAAAAATAAAGAAAGTGGCAAATAAATATGTCTCCTTCTGTGTGAAAAAAGGCTGGTATTTAATTATTTTTTCTTGA

Related Sequences

bmy_14597T0 SequenceType object (3)

Length: 1251 aa      View alignments
>bmy_14597T0
MATAIREVGVWRQTRTLLLKNYLVKCRTKKSSVQEILFPLFFLFLLILISMMHPNKKYEEVPDTELNPMDKSILFNLILGFTPVTNITRDIMQKVSTDHLPSVIITEEYTSEKELLASSLSKSSNFVGVVFKDFMSYELRFFPDMIPVSSVYMDSRAGCSKSCEAVQYWSSGFTVLQASIDAAIIQLKTNVSFWKELEPTKAVLMGETAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHIVAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSCFVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFLVTVAFGFVGLLIVLMESFPKSLVWLLSPFCQCTFLIGIAQVMHLEDFNEGALFSNLTEGPYPLIITIIMLALNSIFYVLLAVYLDQVIPGEFGLRRSSFYFLKPSYWSKSKRNYKELSEGSVSGNISFSEIVEPVSSEFIGKEAIRISAIQKTYRKKGENVEALRSLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASVYGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANNVIQEVLLLDEPTAGMDPCSRHSVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDRYCATESLSSLVKQHIPAATLLQQNDQQLVYSLPFKDMDKFSGLFAALDTHSDLGVISYGVSMTTLEDVFLKLEVEAEIDQADYSVFTQQPPEEELHSKPFDEMEQSLLILSETKASLVSTMSIWKQQVFKIAKFHFLTLKRESKSVRSVLLLLLIFFSVQIFMFLVHHSFKNAVVPIKLAPDLYFLKPGDKPDKYRTSLLLQNSTDSDISDLLSFFTNQNIMVTMFNDSDYVSAAPHSAALNVMQSEKDYVFTAVFNSTMVYSLPVLMNIISNYYLYHSNVTESIQVWNTPFVQEITDIVFKIELYFQAALLGVIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQALVDVPLFSVVLTLMLGSLFSFHYGLYFYAVKFLSVVFCLIGYVPSVILFTYMTSFTFKKIVNTKEFWSFIYSVTALACIAVTEITYFMGYTVTVILHYALCIAIPIYPFLGCLICFIKPYLQCVLWIFLLQTLTTKSKSRKFPEPPNNEDEDEDVRAERVKVKELLSCQRHEEKPAIMVNNLHKEYEDKKDFFLTRKIKKVANKYVSFCVKKGWYLIIFS*